Publications list:
(GenBank summary text ordered by publication month & year)


Pittman JE, Wylie KM, Akers K, Storch GA, Hatch J, Quante J, Frayman KB, Clarke N, Davis M, Stick SM, Hall GL, Montgomery G, Ranganathan S, Davis SD, Ferkol TW; Australian Respiratory Early Surveillance Team for Cystic Fibrosis. Association of Antibiotics, Airway Microbiome, and Inflammation in Infants with Cystic Fibrosis. Ann Am Thorac Soc. 2017 Oct;14(10):1548-1555. doi: 10.1513/AnnalsATS.201702-121OC. PubMed PMID: 28708417.

Dorshow RB, Hall-Moore C, Shaikh N, Talcott MR, Faubion WA, Rogers TE, Shieh JJ, Debreczeny MP, Johnson JR, Dyer RB, Singh RJ, Tarr PI. Measurement of gut permeability using fluorescent tracer agent technology. Sci Rep. 2017 Sep 7;7(1):10888. doi: 10.1038/s41598-017-09971-y. PubMed PMID: 28883476; PubMed Central PMCID: PMC5589723.

Dobbs KR, Embury P, Vulule J, Odada PS, Rosa BA, Mitreva M, Kazura JW, Dent AE. Monocyte dysregulation and systemic inflammation during pediatric falciparum malaria. JCI Insight. 2017 Sep 21;2(18). pii: 95352. doi: 10.1172/jci.insight.95352. [Epub ahead of print] PubMed PMID: 28931756; PubMed Central PMCID: PMC5621919.

Ammerman E, Sweet SC, Fenchel M, Storch GA, Conrad C, Hayes D Jr, Faro A, Goldfarb S, Melicoff E, Schecter M, Visner G, Williams NM, Danziger-Isakov L. Risk and outcomes of pulmonary fungal infection after pediatric lung transplantation. Clin Transplant. 2017 Sep 4. doi: 10.1111/ctr.13100. [Epub ahead of print] PubMed PMID: 28871606.

Chesnais CB, Awaca-Uvon NP, Bolay FK, Boussinesq M, Fischer PU, Gankpala L, Meite A, Missamou F, Pion SD, Weil GJ. A multi-center field study of two point-of-care tests for circulating Wuchereria bancrofti antigenemia in Africa. PLoS Negl Trop Dis. 2017 Sep 11;11(9):e0005703. doi: 10.1371/journal.pntd.0005703. eCollection 2017 Sep. PubMed PMID: 28892473; PubMed Central PMCID: PMC5608416.

Denno DM, Tarr PI, Nataro JP. Environmental Enteric Dysfunction: A Case Definition for Intervention Trials. Am J Trop Med Hyg. 2017 Sep 25. doi: 10.4269/ajtmh.17-0183. [Epub ahead of print] PubMed PMID: 29016294.

Freedman SB, Xie J, Nettel-Aguirre A, Lee B, Chui L, Pang XL, Zhuo R, Parsons B, Dickinson JA, Vanderkooi OG, Ali S, Osterreicher L, Lowerison K, Tarr PI; Alberta Provincial Pediatric EnTeric Infection TEam (APPETITE). Enteropathogen detection in children with diarrhoea, or vomiting, or both, comparing rectal flocked swabs with stool specimens: an outpatient cohort study. Lancet Gastroenterol Hepatol. 2017 Sep;2(9):662-669. doi: 10.1016/S2468-1253(17)30160-7. Epub 2017 Jul 14. PubMed PMID: 28712662.

Melamed R, Storch GA, Holtz LR, Klein EJ, Herrin B, Tarr PI, Denno DM. Case-Control Assessment of the Roles of Noroviruses, Human Bocaviruses 2, 3, and 4, and Novel Polyomaviruses and Astroviruses in Acute Childhood Diarrhea. J Pediatric Infect Dis Soc. 2017 Sep 1;6(3):e49-e54. doi: 10.1093/jpids/piw083. PubMed PMID: 28186546.

Stout MJ, Zhou Y, Wylie KM, Tarr PI, Macones GA, Tuuli MG. Early pregnancy vaginal microbiome trends and preterm birth. Am J Obstet Gynecol. 2017 Sep;217(3):356.e1-356.e18. doi: 10.1016/j.ajog.2017.05.030. Epub 2017 May 23. PubMed PMID: 28549981; PubMed Central PMCID: PMC5581228.

Fotis L, Shaikh N, Baszis KW, Samson CM, Lev-Tzion R, French AR, Tarr PI. Serologic Evidence of Gut-driven Systemic Inflammation in Juvenile Idiopathic Arthritis. J Rheumatol. 2017 Sep 15. pii: jrheum.161589. doi: 10.3899/jrheum.161589. [Epub ahead of print] PubMed PMID: 28916545.

Schnadower D, Tarr PI, Charles CT, Gorelick MH, Dean MJ, O’Connell KJ, Mahajan P, Chun TH, Bhatt SR, Roskind CG, Powell EC, Rogers AJ, Vance C, Sapien RE, Gao F, Freedman SB. Randomised controlled trial of Lactobacillus rhamnosus (LGG) versus placebo in children presenting to the emergency department with acute gastroenteritis: the PECARN probiotic study protocol. BMJ Open. 2017 Sep 24;7(9):e018115. doi: 10.1136/bmjopen-2017-018115. PubMed PMID: 28947466.

Norice-Tra CT, Ribeiro J, Bennuru S, Fay MP, Tyagi R, Mitreva M, Nutman TB. Insights Into Onchocerca volvulus Population Biology Through Multilocus Immunophenotyping. J Infect Dis. 2017 Sep 15;216(6):736-743. doi: 10.1093/infdis/jix394. PubMed PMID: 28934436.

Parrish A, Fenchel M, Storch GA, Buller R, Mason S, Williams N, Ikle D, Conrad C, Faro A, Goldfarb S, Hayes D Jr, Melicoff-Portillo E, Schecter M, Visner G, Sweet S, Danziger-Isakov L; Clinical Trials in Organ Transplantation in Children (CTOTC-03). Epstein-Barr viral loads do not predict post-transplant lymphoproliferative disorder in pediatric lung transplant recipients: A multicenter prospective cohort study. Pediatr Transplant. 2017 Sep;21(6). doi: 10.1111/petr.13011. Epub 2017 Jun 21. PubMed PMID: 28639398; PubMed Central PMCID: PMC5568922.

Amadi B, Besa E, Zyambo K, Kaonga P, Louis-Auguste J, Chandwe K, Tarr PI, Denno DM, Nataro JP, Faubion W, Sailer A, Yeruva S, Brantner T, Murray J, Prendergast AJ, Turner JR, Kelly P. Impaired Barrier Function and Autoantibody Generation in Malnutrition Enteropathy in Zambia. EBioMedicine. 2017 Aug;22:191-199. doi: 10.1016/j.ebiom.2017.07.017. Epub 2017 Jul 19. PubMed PMID: 28750860; PubMed Central PMCID: PMC5552244.

Pion SDS, Chesnais CB, Weil GJ, Fischer PU, Missamou F, Boussinesq M. Effect of 3 years of biannual mass drug administration with albendazole on lymphatic filariasis and soil-transmitted helminth infections: a community-based study in Republic of the Congo. Lancet Infect Dis. 2017 Jul;17(7):763-769. doi: 10.1016/S1473-3099(17)30175-5. Epub 2017 Mar 31. PubMed PMID: 28372977.

Amadi B, Besa E, Zyambo K, Kaonga P, Louis-Auguste J, Chandwe K, Tarr PI, Denno DM, Nataro JP, Faubion W, Sailer A, Yeruva S, Brantner T, Murray J, Prendergast AJ, Turner JR, Kelly P. Impaired Barrier Function and Autoantibody Generation in Malnutrition Enteropathy in Zambia. EBioMedicine. 2017 Jul 19. pii: S2352-3964(17)30290-6. doi: 10.1016/j.ebiom.2017.07.017. [Epub ahead of print] PubMed PMID: 28750860.

Freedman SB, Xie J, Nettel-Aguirre A, Lee B, Chui L, Pang XL, Zhuo R, Parsons B, Dickinson JA, Vanderkooi OG, Ali S, Osterreicher L, Lowerison K, Tarr PI; Alberta Provincial Pediatric EnTeric Infection TEam (APPETITE). Enteropathogen detection in children with diarrhoea, or vomiting, or both, comparing rectal flocked swabs with stool specimens: an outpatient cohort study. Lancet Gastroenterol Hepatol. 2017 Jul 13. pii: S2468-1253(17)30160-7. doi: 10.1016/S2468-1253(17)30160-7. [Epub ahead of print] PubMed PMID: 28712662.

Pittman JE, Wylie KM, Akers K, Storch GA, Hatch J, Quante J, Frayman KB, Clarke N, Davis M, Stick SM, Hall GL, Montgomery G, Ranganathan S, Davis SD, Ferkol TW; AREST CF. Association of Antibiotics, Airway Microbiome and Inflammation in Infants with Cystic Fibrosis. Ann Am Thorac Soc. 2017 Jul 14. doi: 10.1513/AnnalsATS.201702-121OC. [Epub ahead of print] PubMed PMID: 28708417.

Barron LK, Warner BB, Tarr PI, Shannon WD, Deych E, Warner BW. Independence of gut bacterial content and neonatal necrotizing enterocolitis severity. J Pediatr Surg. 2017 Jun;52(6):993-998. doi: 10.1016/j.jpedsurg.2017.03.029. Epub 2017 Apr 5. PubMed PMID: 28410788; PubMed Central PMCID: PMC5473614.

Parrish A, Fenchel M, Storch GA, Buller R, Mason S, Williams N, Ikle D, Conrad C, Faro A, Goldfarb S, Hayes D Jr, Melicoff-Portillo E, Schecter M, Visner G, Sweet S, Danziger-Isakov L; Clinical Trials in Organ Transplantation in Children (CTOTC-03). Epstein-Barr viral loads do not predict post-transplant lymphoproliferative disorder in pediatric lung transplant recipients: A multicenter prospective cohort study. Pediatr Transplant. 2017 Jun 21. doi: 10.1111/petr.13011. [Epub ahead of print] PubMed PMID: 28639398.

Tomassini Barbarossa I, Ozdener MH, Melis M, Love-Gregory L, Mitreva M, Abumrad NA, Pepino MY. Variant in a common odorant-binding protein gene is associated with bitter sensitivity in people. Behav Brain Res. 2017 Jun 30;329:200-204. doi: 10.1016/j.bbr.2017.05.015. Epub 2017 May 6. PubMed PMID: 28487220; PubMed Central PMCID: PMC5534261.

Ahmad FA, Storch GA, Miller AS. Impact of an Institutional Guideline on the Care of Neonates at Risk for Herpes Simplex Virus in the Emergency Department. Pediatr Emerg Care. 2017 Jun;33(6):396-401. doi: 10.1097/PEC.0000000000000498. PubMed PMID: 26308608.

Choi YJ, Bisset SA, Doyle SR, Hallsworth-Pepin K, Martin J, Grant WN, Mitreva M. Genomic introgression mapping of field-derived multiple-anthelmintic resistance in Teladorsagia circumcincta. PLoS Genet. 2017 Jun 23;13(6):e1006857. doi: 10.1371/journal.pgen.1006857. eCollection 2017 Jun. PubMed PMID: 28644839; PubMed Central PMCID: PMC5507320.

Bahr NC, Trotman RL, Samman H, Jung RS, Rosterman LR, Weil GJ, Hinthorn DR. Eosinophilic Meningitis Due to Infection With Paragonimus kellicotti. Clin Infect Dis. 2017 May 1;64(9):1271-1274. doi: 10.1093/cid/cix102. PubMed PMID: 28158416.

Stout MJ, Zhou Y, Wylie KM, Tarr PI, Macones GA, Tuuli MG. Early pregnancy vaginal microbiome trends and preterm birth. Am J Obstet Gynecol. 2017 May 23. pii: S0002-9378(17)30641-5. doi: 10.1016/j.ajog.2017.05.030. [Epub ahead of print] PubMed PMID: 28549981.

Seifert ME, Gunasekaran M, Horwedel TA, Daloul R, Storch GA, Mohanakumar T, Brennan DC. Polyomavirus Reactivation and Immune Responses to Kidney-Specific Self-Antigens in Transplantation. J Am Soc Nephrol. 2017 Apr;28(4):1314-1325. doi: 10.1681/ASN.2016030285. Epub 2016 Nov 7. PubMed PMID: 27821629; PubMed Central PMCID: PMC5373442.

Irvine MA, Stolk WA, Smith ME, Subramanian S, Singh BK, Weil GJ, Michael E, Hollingsworth TD. Effectiveness of a triple-drug regimen for global elimination of lymphatic filariasis: a modelling study. Lancet Infect Dis. 2017 Apr;17(4):451-458. doi: 10.1016/S1473-3099(16)30467-4. Epub 2016 Dec 22. PubMed PMID: 28012943.

Rosa BA, McNulty SN, Mitreva M, Jasmer DP. Direct experimental manipulation of intestinal cells in Ascaris suum, with minor influences on the global transcriptome. Int J Parasitol. 2017 Apr;47(5):271-279. doi: 10.1016/j.ijpara.2016.12.005. Epub 2017 Feb 20. PubMed PMID: 28223178; PubMed Central PMCID: PMC5423655.

Pammi M, Cope J, Tarr PI, Warner BB, Morrow AL, Mai V, Gregory KE, Kroll JS, McMurtry V, Ferris MJ, Engstrand L, Lilja HE, Hollister EB, Versalovic J, Neu J. Intestinal dysbiosis in preterm infants preceding necrotizing enterocolitis: a systematic review and meta-analysis. Microbiome. 2017 Mar 9;5(1):31. doi: 10.1186/s40168-017-0248-8. Review. PubMed PMID: 28274256; PubMed Central PMCID: PMC5343300.

Frayman KB, Armstrong DS, Carzino R, Ferkol TW, Grimwood K, Storch GA, Teo SM, Wylie KM, Ranganathan SC. The lower airway microbiota in early cystic fibrosis lung disease: a longitudinal analysis. Thorax. 2017 Mar 9. pii: thoraxjnl-2016-209279. doi: 10.1136/thoraxjnl-2016-209279. [Epub ahead of print] PubMed PMID: 28280235.

Wylie KM, Wylie TN, Storch GA. Genome Sequence of Enterovirus D68 from St. Louis, Missouri, USA, 2016. Genome Announc. 2017 Mar 2;5(9). pii: e01630-16. doi: 10.1128/genomeA.01630-16. PubMed PMID: 28254971; PubMed Central PMCID: PMC5334578.

Ordiz MI, Stephenson K, Agapova S, Wylie KM, Maleta K, Martin J, Trehan I, Tarr PI, Manary MJ. Environmental Enteric Dysfunction and the Fecal Microbiota in Malawian Children. Am J Trop Med Hyg. 2017 Feb 8;96(2):473-476. doi: 10.4269/ajtmh.16-0617. Epub 2016 Dec 12. PubMed PMID: 27956653; PubMed Central PMCID: PMC5303055.

Rashidi A, Vij KR, Buller RS, Wylie KM, Storch GA, DiPersio JF. Tissue polymerase chain reaction for the diagnosis of cytomegalovirus disease after allogeneic hematopoietic cell transplantation. Am J Hematol. 2017 Feb;92(2):E19-E20. doi: 10.1002/ajh.24609. PubMed PMID: 27859620.

Melamed R, Storch GA, Holtz LR, Klein EJ, Herrin B, Tarr PI, Denno DM. Case-Control Assessment of the Roles of Noroviruses, Human Bocaviruses 2, 3, and 4, and Novel Polyomaviruses and Astroviruses in Acute Childhood Diarrhea. J Pediatric Infect Dis Soc. 2017 Feb 10. doi: 10.1093/jpids/piw083. [Epub ahead of print] PubMed PMID: 28186546.

Grisaru S, Xie J, Samuel S, Hartling L, Tarr PI, Schnadower D, Freedman SB; Alberta Provincial Pediatric Enteric Infection Team. Associations Between Hydration Status, Intravenous Fluid Administration, and Outcomes of Patients Infected With Shiga Toxin-Producing Escherichia coli: A Systematic Review and Meta-analysis. JAMA Pediatr. 2017 Jan 1;171(1):68-76. doi: 10.1001/jamapediatrics.2016.2952. Review. PubMed PMID: 27893870.

Fischer PU, King CL, Jacobson JA, Weil GJ. Potential Value of Triple Drug Therapy with Ivermectin, Diethylcarbamazine, and Albendazole (IDA) to Accelerate Elimination of Lymphatic Filariasis and Onchocerciasis in Africa. PLoS Negl Trop Dis. 2017 Jan 5;11(1):e0005163. doi: 10.1371/journal.pntd.0005163. eCollection 2017 Jan. PubMed PMID: 28056015; PubMed Central PMCID: PMC5215784.

McNulty SN, Tort JF, Rinaldi G, Fischer K, Rosa BA, Smircich P, Fontenla S, Choi YJ, Tyagi R, Hallsworth-Pepin K, Mann VH, Kammili L, Latham PS, Dell’Oca N, Dominguez F, Carmona C, Fischer PU, Brindley PJ, Mitreva M. Genomes of Fasciola hepatica from the Americas Reveal Colonization with Neorickettsia Endobacteria Related to the Agents of Potomac Horse and Human Sennetsu Fevers. PLoS Genet. 2017 Jan 6;13(1):e1006537. doi: 10.1371/journal.pgen.1006537. eCollection 2017 Jan. PubMed PMID: 28060841; PubMed Central PMCID: PMC5257007.

Rosa BA, Hallsworth-Pepin K, Martin J, Wollam A, Mitreva M. Genome Sequence of Christensenella minuta DSM 22607T. Genome Announc. 2017 Jan 12;5(2). pii: e01451-16. doi: 10.1128/genomeA.01451-16. PubMed PMID: 28082495; PubMed Central PMCID: PMC5256218.

Tarr PI, Warner BB. Gut bacteria and late-onset neonatal bloodstream infections in preterm infants. Semin Fetal Neonatal Med. 2016 Dec;21(6):388-393. doi: 10.1016/j.siny.2016.06.002. Epub 2016 Jun 23. Review. PubMed PMID: 27345372.

Warner BB, Tarr PI. Necrotizing enterocolitis and preterm infant gut bacteria. Semin Fetal Neonatal Med. 2016 Dec;21(6):394-399. doi: 10.1016/j.siny.2016.06.001. Epub 2016 Jun 22. Review. PubMed PMID: 27343151; PubMed Central PMCID: PMC5116248.

Wylie KM, Stanley KM, TeKippe EM, Mihindukulasuriya K, Storch GA. Resurgence of Rotavirus Genotype G12 in St. Louis During the 2014-2015 Rotavirus Season. J Pediatric Infect Dis Soc. 2016 Dec 17. pii: piw065. [Epub ahead of print] PubMed PMID: 27988496.

Torbati ME, Mitreva M, Gopalakrishnan V. Application of Taxonomic Modeling to Microbiota Data Mining for Detection of Helminth Infection in Global Populations. Data (Basel). 2016 Dec;1(3). pii: 19. doi: 10.3390/data1030019. Epub 2016 Dec 13. PubMed PMID: 28239609; PubMed Central PMCID: PMC5325162.

Giacomin P, Zakrzewski M, Jenkins TP, Su X, Al-Hallaf R, Croese J, de Vries S, Grant A, Mitreva M, Loukas A, Krause L, Cantacessi C. Changes in duodenal tissue-associated microbiota following hookworm infection and consecutive gluten challenges in humans with coeliac disease. Sci Rep. 2016 Nov 9;6:36797. doi: 10.1038/srep36797. PubMed PMID: 27827438; PubMed Central PMCID: PMC5101533.

Zarlenga D, Wang Z, Mitreva M. Trichinella spiralis: Adaptation and parasitism. Vet Parasitol. 2016 Nov 15;231:8-21. doi: 10.1016/j.vetpar.2016.07.003. Epub 2016 Jul 2. PubMed PMID: 27425574; PubMed Central PMCID: PMC5127757.

Ordiz MI, Shaikh N, Trehan I, Maleta K, Stauber J, Shulman R, Devaraj S, Tarr PI, Manary MJ. Environmental Enteric Dysfunction Is Associated With Poor Linear Growth and Can Be Identified by Host Fecal mRNAs. J Pediatr Gastroenterol Nutr. 2016 Nov;63(5):453-459. PubMed PMID: 27347722; PubMed Central PMCID: PMC5084633.

Choi YJ, Tyagi R, McNulty SN, Rosa BA, Ozersky P, Martin J, Hallsworth-Pepin K, Unnasch TR, Norice CT, Nutman TB, Weil GJ, Fischer PU, Mitreva M. Genomic diversity in Onchocerca volvulus and its Wolbachia endosymbiont. Nat Microbiol. 2016 Nov 21;2:16207. doi: 10.1038/nmicrobiol.2016.207. PubMed PMID: 27869792; PubMed Central PMCID: PMC5512550.

Hang L, Blum AM, Kumar S, Urban JF Jr, Mitreva M, Geary TG, Jardim A, Stevenson MM, Lowell CA, Weinstock JV. Downregulation of the Syk Signaling Pathway in Intestinal Dendritic Cells Is Sufficient To Induce Dendritic Cells That Inhibit Colitis. J Immunol. 2016 Oct 1;197(7):2948-57. doi: 10.4049/jimmunol.1600063. Epub 2016 Aug 24. PubMed PMID: 27559049; PubMed Central PMCID: PMC5026942.

Zhou Y, Bacharier LB, Isaacson-Schmid M, Baty J, Schechtman KB, Sajol G, Wylie K, Storch GA, Castro M, Beigelman A. Azithromycin therapy during respiratory syncytial virus bronchiolitis: Upper airway microbiome alterations and subsequent recurrent wheeze. J Allergy Clin Immunol. 2016 Oct;138(4):1215-1219.e5. doi: 10.1016/j.jaci.2016.03.054. Epub 2016 May 18. PubMed PMID: 27339392; PubMed Central PMCID: PMC5056860.

Gasparrini AJ, Crofts TS, Gibson MK, Tarr PI, Warner BB, Dantas G. Antibiotic perturbation of the preterm infant gut microbiome and resistome. Gut Microbes. 2016 Sep 2;7(5):443-9. doi: 10.1080/19490976.2016.1218584. Epub 2016 Jul 29. PubMed PMID: 27472377; PubMed Central PMCID: PMC5154371.

Wei J, Damania A, Gao X, Liu Z, Mejia R, Mitreva M, Strych U, Bottazzi ME, Hotez PJ, Zhan B. The hookworm Ancylostoma ceylanicum intestinal transcriptome provides a platform for selecting drug and vaccine candidates. Parasit Vectors. 2016 Sep 27;9(1):518. PubMed PMID: 27677574; PubMed Central PMCID: PMC5039805.

Lewis AL, Deitzler GE, Ruiz MJ, Weimer C, Park S, Robinson LS, Hallsworth-Pepin K, Wollam A, Mitreva M, Lewis WG. Genome Sequences of 11 Human Vaginal Actinobacteria Strains. Genome Announc. 2016 Sep 29;4(5). pii: e00887-16. doi: 10.1128/genomeA.00887-16. PubMed PMID: 27688328; PubMed Central PMCID: PMC5043546.

Weimer CM, Deitzler GE, Robinson LS, Park S, Hallsworth-Pepin K, Wollam A, Mitreva M, Lewis WG, Lewis AL. Genome Sequences of 12 Bacterial Isolates Obtained from the Urine of Pregnant Women. Genome Announc. 2016 Sep 29;4(5). pii: e00882-16. doi: 10.1128/genomeA.00882-16. PubMed PMID: 27688327; PubMed Central PMCID: PMC5043545.

Li BW, McNulty SN, Rosa BA, Tyagi R, Zeng QR, Gu KZ, Weil GJ, Mitreva M. Conservation and diversification of the transcriptomes of adult Paragonimus westermani and P. skrjabini. Parasit Vectors. 2016 Sep 13;9:497. doi: 10.1186/s13071-016-1785-x. PubMed PMID: 27619014.

Hang L, Blum AM, Kumar S, Urban JF Jr, Mitreva M, Geary TG, Jardim A, Stevenson MM, Lowell CA, Weinstock JV. Downregulation of the Syk Signaling Pathway in Intestinal Dendritic Cells Is Sufficient To Induce Dendritic Cells That Inhibit Colitis. J Immunol. 2016 Aug 24. pii: 1600063. [Epub ahead of print] PubMed PMID: 27559049.

Zhang J, Gao X, Martin J, Rosa B, Chen Z, Mitreva M, Henrich T, Kuritzkes D, Ratner L. Evolution of coreceptor utilization to escape CCR5 antagonist therapy. Virology. 2016 Jul;494:198-214. doi: 10.1016/j.virol.2016.04.010. Epub 2016 Apr 26. PubMed PMID: 27128349; PubMed Central PMCID: PMC4913893.

Gasparrini AJ, Crofts TS, Gibson MK, Tarr PI, Warner BB, Dantas G. Antibiotic perturbation of the preterm infant gut microbiome and resistome. Gut Microbes. 2016 Jul 29:1-7. [Epub ahead of print] PubMed PMID: 27472377.

Zarlenga D, Wang Z, Mitreva M. Trichinella spiralis: Adaptation and parasitism. Vet Parasitol. 2016 Jul 2. pii: S0304-4017(16)30262-X. doi: 10.1016/j.vetpar.2016.07.003. [Epub ahead of print] PubMed PMID: 27425574.

Padhye A, Storch GA. Relationship of human bocavirus 2 to gastroenteritis in children. J Clin Virol. 2016 Jul;80:72-3. doi: 10.1016/j.jcv.2016.03.023. Epub 2016 Mar 31. PubMed PMID: 27208921.

Iroh Tam PY, Obaro SK, Storch G. Challenges in the Etiology and Diagnosis of Acute Febrile Illness in Children in Low- and Middle-Income Countries. J Pediatric Infect Dis Soc. 2016 Jun;5(2):190-205. doi: 10.1093/jpids/piw016. Epub 2016 Apr 7. Review. PubMed PMID: 27059657.

Warner BB, Tarr PI. Necrotizing enterocolitis and preterm infant gut bacteria. Semin Fetal Neonatal Med. 2016 Jun 22. pii: S1744-165X(16)30027-0. doi: 10.1016/j.siny.2016.06.001. [Epub ahead of print] Review. PubMed PMID: 27343151.

Rusconi B, Sanjar F, Koenig SS, Mammel MK, Tarr PI, Eppinger M. Whole Genome Sequencing for Genomics-Guided Investigations of Escherichia coli O157:H7 Outbreaks. Front Microbiol. 2016 Jun 30;7:985. doi: 10.3389/fmicb.2016.00985. eCollection 2016. PubMed PMID: 27446025; PubMed Central PMCID: PMC4928038.

Tarr PI, Warner BB. Gut bacteria and late-onset neonatal bloodstream infections in preterm infants. Semin Fetal Neonatal Med. 2016 Jun 23. pii: S1744-165X(16)30028-2. doi: 10.1016/j.siny.2016.06.002. [Epub ahead of print] Review. PubMed PMID: 27345372.

Chesnais CB, Vlaminck J, Kunyu-Shako B, Pion SD, Awaca-Uvon NP, Weil GJ, Mumba D, Boussinesq M. Measurement of Circulating Filarial Antigen Levels in Human Blood with a Point-of-Care Test Strip and a Portable Spectrodensitometer. Am J Trop Med Hyg. 2016 Jun 1;94(6):1324-9. doi: 10.4269/ajtmh.15-0916. Epub 2016 Apr 25. PubMed PMID: 27114288; PubMed Central PMCID: PMC4889752.

Ordiz MI, Shaikh N, Trehan I, Maleta K, Stauber J, Shulman R, Devaraj S, Tarr PI, Manary MJ. Environmental Enteric Dysfunction is Associated with Poor Linear Growth and Can be Identified by Host Fecal mRNAs. J Pediatr Gastroenterol Nutr. 2016 Jun 24. [Epub ahead of print] PubMed PMID: 27347722.

Stauber J, Shaikh N, Ordiz MI, Tarr PI, Manary MJ. Droplet digital PCR quantifies host inflammatory transcripts in feces reliably and reproducibly. Cell Immunol. 2016 May;303:43-9. doi: 10.1016/j.cellimm.2016.03.007. Epub 2016 Apr 6. PubMed PMID: 27063479; PubMed Central PMCID: PMC4863679.

Zhou Y, Bacharier LB, Isaacson-Schmid M, Baty J, Schechtman KB, Sajol G, Wylie K, Storch GA, Castro M, Beigelman A. Azithromycin therapy during respiratory syncytial virus bronchiolitis: Upper airway microbiome alterations and subsequent recurrent wheeze. J Allergy Clin Immunol. 2016 May 18. pii: S0091-6749(16)30288-3. doi: 10.1016/j.jaci.2016.03.054. [Epub ahead of print] PubMed PMID: 27339392.

Planer JD, Peng Y, Kau AL, Blanton LV, Ndao IM, Tarr PI, Warner BB, Gordon JI. Development of the gut microbiota and mucosal IgA responses in twins and gnotobiotic mice. Nature. 2016 May 25;534(7606):263-6. doi: 10.1038/nature17940. PubMed PMID: 27279225; PubMed Central PMCID: PMC4902178.

Freedman SB, Xie J, Neufeld MS, Hamilton WL, Hartling L, Tarr PI; Alberta Provincial Pediatric Enteric Infection Team (APPETITE). Shiga Toxin-Producing Escherichia coli Infection, Antibiotics, and Risk of Developing Hemolytic Uremic Syndrome: A Meta-analysis. Clin Infect Dis. 2016 May 15;62(10):1251-8. doi: 10.1093/cid/ciw099. Epub 2016 Feb 24. PubMed PMID: 26917812; PubMed Central PMCID: PMC4845788.

Warner BB, Deych E, Zhou Y, Hall-Moore C, Weinstock GM, Sodergren E, Shaikh N, Hoffmann JA, Linneman LA, Hamvas A, Khanna G, Rouggly-Nickless LC, Ndao IM, Shands BA, Escobedo M, Sullivan JE, Radmacher PG, Shannon WD, Tarr PI. Gut bacteria dysbiosis and necrotising enterocolitis in very low birthweight infants: a prospective case-control study. Lancet. 2016 May 7;387(10031):1928-36. doi: 10.1016/S0140-6736(16)00081-7. Epub 2016 Mar 9. PubMed PMID: 26969089.

Rao RU, Samarasekera SD, Nagodavithana KC, Punchihewa MW, Dassanayaka TD, P K D G, Ford E, Ranasinghe US, Henderson RH, Weil GJ. Programmatic Use of Molecular Xenomonitoring at the Level of Evaluation Units to Assess Persistence of Lymphatic Filariasis in Sri Lanka. PLoS Negl Trop Dis. 2016 May 19;10(5):e0004722. doi: 10.1371/journal.pntd.0004722. eCollection 2016 May. PubMed PMID: 27196431; PubMed Central PMCID: PMC4873130.

Wang Q, Heizer E, Rosa BA, Wildman SA, Janetka JW, Mitreva M. Characterization of parasite-specific indels and their proposed relevance for selective anthelminthic drug targeting. Infect Genet Evol. 2016 Apr;39:201-11. doi: 10.1016/j.meegid.2016.01.025. Epub 2016 Jan 30. PubMed PMID: 26829384; PubMed Central PMCID: PMC4789095.

Wylie KM, Blanco-Guzman M, Wylie TN, Lawrence SJ, Ghobadi A, DiPersio JF, Storch GA. High-throughput sequencing of cerebrospinal fluid for diagnosis of chronic Propionibacterium acnes meningitis in an allogeneic stem cell transplant recipient. Transpl Infect Dis. 2016 Apr;18(2):227-33. doi: 10.1111/tid.12512. Epub 2016 Mar 31. PubMed PMID: 26895706.

Vlaminck J, Supali T, Geldhof P, Hokke CH, Fischer PU, Weil GJ. Community Rates of IgG4 Antibodies to Ascaris Haemoglobin Reflect Changes in Community Egg Loads Following Mass Drug Administration. PLoS Negl Trop Dis. 2016 Mar 18;10(3):e0004532. doi: 10.1371/journal.pntd.0004532. eCollection 2016 Mar. PubMed PMID: 26991326; PubMed Central PMCID: PMC4798312.

Gibson MK, Wang B, Ahmadi S, Burnham CA, Tarr PI, Warner BB, Dantas G. Developmental dynamics of the preterm infant gut microbiota and antibiotic resistome. Nat Microbiol. 2016 Mar 7;1:16024. doi: 10.1038/nmicrobiol.2016.24. PubMed PMID: 27572443.

Abzug MJ, Michaels MG, Wald E, Jacobs RF, Romero JR, Sánchez PJ, Wilson G, Krogstad P, Storch GA, Lawrence R, Shelton M, Palmer A, Robinson J, Dennehy P, Sood SK, Cloud G, Jester P, Acosta EP, Whitley R, Kimberlin D; National Institute of Allergy and Infectious Diseases Collaborative Antiviral Study Group. A Randomized, Double-Blind, Placebo-Controlled Trial of Pleconaril for the Treatment of Neonates With Enterovirus Sepsis. J Pediatric Infect Dis Soc. 2016 Mar;5(1):53-62. doi: 10.1093/jpids/piv015. Epub 2015 Apr 16. PubMed PMID: 26407253; PubMed Central PMCID: PMC4765488.

Bogus J, Gankpala L, Fischer K, Krentel A, Weil GJ, Fischer PU, Kollie K, Bolay FK. Community Attitudes Toward Mass Drug Administration for Control and Elimination of Neglected Tropical Diseases After the 2014 Outbreak of Ebola Virus Disease in Lofa County, Liberia. Am J Trop Med Hyg. 2016 Mar;94(3):497-503. doi: 10.4269/ajtmh.15-0591. Epub 2015 Dec 14. PubMed PMID: 26666700; PubMed Central PMCID: PMC4775880.

Gao X, Tyagi R, Magrini V, Ly A, Jasmer DP, Mitreva M. Compartmentalization of functions and predicted miRNA regulation among contiguous regions of the Nematode Intestine. RNA Biol. 2016 Mar 22:0. [Epub ahead of print] PubMed PMID: 27002534.

Yu J, Ordiz MI, Stauber J, Shaikh N, Trehan I, Barnell E, Head RD, Maleta K, Tarr PI, Manary MJ. Environmental Enteric Dysfunction Includes a Broad Spectrum of Inflammatory Responses and Epithelial Repair Processes. Cell Mol Gastroenterol Hepatol. 2015 Dec 11;2(2):158-174.e1. eCollection 2016 Feb. PubMed PMID: 26973864; PubMed Central PMCID: PMC4769221.

Simpson KE, Storch GA, Lee CK, Ward KE, Danon S, Simon CM, Delaney JW, Tong A, Canter CE. High Frequency of Detection by PCR of Viral Nucleic Acid in The Blood of Infants Presenting with Clinical Myocarditis. Pediatr Cardiol. 2016 Feb;37(2):399-404. doi: 10.1007/s00246-015-1290-6. Epub 2015 Oct 26. PubMed PMID: 26499513; PubMed Central PMCID: PMC4775434.

Zhou Y, Wylie KM, El Feghaly RE, Mihindukulasuriya KA, Elward A, Haslam DB, Storch GA, Weinstock GM. Metagenomic Approach for Identification of the Pathogens Associated with Diarrhea in Stool Specimens. J Clin Microbiol. 2016 Feb;54(2):368-75. doi: 10.1128/JCM.01965-15. Epub 2015 Dec 4. PubMed PMID: 26637379; PubMed Central PMCID: PMC4733167.

Thomsen EK, Sanuku N, Baea M, Satofan S, Maki E, Lombore B, Schmidt MS, Siba PM, Weil GJ, Kazura JW, Fleckenstein LL, King CL. Efficacy, Safety, and Pharmacokinetics of Coadministered Diethylcarbamazine, Albendazole, and Ivermectin for Treatment of Bancroftian Filariasis. Clin Infect Dis. 2016 Feb 1;62(3):334-41. doi: 10.1093/cid/civ882. Epub 2015 Oct 20. PubMed PMID: 26486704.

McNulty SN, Strübe C, Rosa BA, Martin JC, Tyagi R, Choi YJ, Wang Q, Hallsworth Pepin K, Zhang X, Ozersky P, Wilson RK, Sternberg PW, Gasser RB, Mitreva M. Dictyocaulus viviparus genome, variome and transcriptome elucidate lungworm biology and support future intervention. Sci Rep. 2016 Feb 9;6:20316. doi: 10.1038/srep20316. PubMed PMID: 26856411; PubMed Central PMCID: PMC4746573.

Blair D, Nawa Y, Mitreva M, Doanh PN. Gene diversity and genetic variation in lung flukes (genus Paragonimus). Trans R Soc Trop Med Hyg. 2016 Jan;110(1):6-12. doi: 10.1093/trstmh/trv101. Review. PubMed PMID: 26740357.

Li BW, Rush AC, Weil GJ. Expression of five acetylcholine receptor subunit genes in Brugia malayi adult worms. Int J Parasitol Drugs Drug Resist. 2015 Jun 23;5(3):100-9. doi: 10.1016/j.ijpddr.2015.04.003. eCollection 2015 Dec. PubMed PMID: 26199859; PubMed Central PMCID: PMC4506985.

McNulty SN, Rosa BA, Fischer PU, Rumsey JM, Erdmann-Gilmore P, Curtis KC, Specht S, Townsend RR, Weil GJ, Mitreva M. An Integrated Multiomics Approach to Identify Candidate Antigens for Serodiagnosis of Human Onchocerciasis. Mol Cell Proteomics. 2015 Dec;14(12):3224-33. doi: 10.1074/mcp.M115.051953. Epub 2015 Oct 15. PubMed PMID: 26472727; PubMed Central PMCID: PMC4762623.

Wylie TN, Wylie KM, Herter BN, Storch GA. Enhanced virome sequencing using targeted sequence capture. Genome Res. 2015 Dec;25(12):1910-20. doi: 10.1101/gr.191049.115. Epub 2015 Sep 22. PubMed PMID: 26395152; PubMed Central PMCID: PMC4665012.

Crotty MP, Meyers S, Hampton N, Bledsoe S, Ritchie DJ, Buller RS, Storch GA, Micek ST, Kollef MH. Epidemiology, Co-Infections, and Outcomes of Viral Pneumonia in Adults: An Observational Cohort Study. Medicine (Baltimore). 2015 Dec;94(50):e2332. doi: 10.1097/MD.0000000000002332. PubMed PMID: 26683973.

Gurnee EA, Ndao IM, Johnson JR, Johnston BD, Gonzalez MD, Burnham CA, Hall-Moore CM, McGhee JE, Mellmann A, Warner BB, Tarr PI. Gut Colonization of Healthy Children and Their Mothers With Pathogenic Ciprofloxacin-Resistant Escherichia coli. J Infect Dis. 2015 Dec 15;212(12):1862-8. doi: 10.1093/infdis/jiv278. Epub 2015 May 12. PubMed PMID: 25969564; PubMed Central PMCID: PMC4655851.

Wylie KM, Weinstock GM, Storch GA. Emergence of Rotavirus G12P[8] in St. Louis During the 2012-2013 Rotavirus Season. J Pediatric Infect Dis Soc. 2015 Dec;4(4):e84-9. doi: 10.1093/jpids/piu090. Epub 2014 Sep 15. PubMed PMID: 26513823; PubMed Central PMCID: PMC4681384.

Vlaminck J, Fischer PU, Weil GJ. Diagnostic Tools for Onchocerciasis Elimination Programs. Trends Parasitol. 2015 Nov;31(11):571-82. doi: 10.1016/j.pt.2015.06.007. Epub 2015 Oct 11. Review. PubMed PMID: 26458784.

Tyagi R, Joachim A, Ruttkowski B, Rosa BA, Martin JC, Hallsworth-Pepin K, Zhang X, Ozersky P, Wilson RK, Ranganathan S, Sternberg PW, Gasser RB, Mitreva M. Cracking the nodule worm code advances knowledge of parasite biology and biotechnology to tackle major diseases of livestock. Biotechnol Adv. 2015 Nov 1;33(6 Pt 1):980-91. doi: 10.1016/j.biotechadv.2015.05.004. Epub 2015 May 27. Review. PubMed PMID: 26026709; PubMed Central PMCID: PMC4746232.

Crotty MP, Meyers S, Hampton N, Bledsoe S, Ritchie DJ, Buller RS, Storch GA, Kollef MH, Micek ST. Impact of antibacterials on subsequent resistance and clinical outcomes in adult patients with viral pneumonia: an opportunity for stewardship. Crit Care. 2015 Nov 18;19:404. doi: 10.1186/s13054-015-1120-5. PubMed PMID: 26577540; PubMed Central PMCID: PMC4650137.

Beigelman A, Bacharier LB, Baty J, Buller R, Mason S, Schechtman KB, Sajol G, Isaacson-Schmid M, Castro M, Storch GA. Does azithromycin modify viral load during severe respiratory syncytial virus bronchiolitis? J Allergy Clin Immunol. 2015 Oct;136(4):1129-31. doi: 10.1016/j.jaci.2015.06.011. Epub 2015 Jul 26. PubMed PMID: 26215052; PubMed Central PMCID: PMC4600448.

Storch GA. Editorial Commentary: Plethora of Respiratory Viruses and Respiratory Virus Data. Clin Infect Dis. 2015 Oct 15;61(8):1225-7. doi: 10.1093/cid/civ487. Epub 2015 Aug 4. PubMed PMID: 26245664.

Lim ES, Zhou Y, Zhao G, Bauer IK, Droit L, Ndao IM, Warner BB, Tarr PI, Wang D, Holtz LR. Early life dynamics of the human gut virome and bacterial microbiome in infants. Nat Med. 2015 Oct;21(10):1228-34. doi: 10.1038/nm.3950. Epub 2015 Sep 14. PubMed PMID: 26366711; PubMed Central PMCID: PMC4710368.

Julian S, Burnham CA, Sellenriek P, Shannon WD, Hamvas A, Tarr PI, Warner BB. Impact of neonatal intensive care bed configuration on rates of late-onset bacterial sepsis and methicillin-resistant Staphylococcus aureus colonization. Infect Control Hosp Epidemiol. 2015 Oct;36(10):1173-82. doi: 10.1017/ice.2015.144. Epub 2015 Jun 25. PubMed PMID: 26108888.

Muñoz JF, Gauthier GM, Desjardins CA, Gallo JE, Holder J, Sullivan TD, Marty AJ, Carmen JC, Chen Z, Ding L, Gujja S, Magrini V, Misas E, Mitreva M, Priest M, Saif S, Whiston EA, Young S, Zeng Q, Goldman WE, Mardis ER, Taylor JW, McEwen JG, Clay OK, Klein BS, Cuomo CA. The Dynamic Genome and Transcriptome of the Human Fungal Pathogen Blastomyces and Close Relative Emmonsia. PLoS Genet. 2015 Oct 6;11(10):e1005493. doi: 10.1371/journal.pgen.1005493. eCollection 2015 Oct. PubMed PMID: 26439490; PubMed Central PMCID: PMC4595289.

Chamberland RR, Burnham CA, Storch GA, Jackups R, Doern CD. Prevalence and Seasonal Distribution of Norovirus Detection in Stools Submitted From Pediatric Patients for Enteric Pathogen Testing. J Pediatric Infect Dis Soc. 2015 Sep;4(3):264-6. doi: 10.1093/jpids/piu040. Epub 2014 Jun 2. PubMed PMID: 26407431.

Ordiz MI, May TD, Mihindukulasuriya K, Martin J, Crowley J, Tarr PI, Ryan K, Mortimer E, Gopalsamy G, Maleta K, Mitreva M, Young G, Manary MJ. The effect of dietary resistant starch type 2 on the microbiota and markers of gut inflammation in rural Malawi children. Microbiome. 2015 Sep 3;3:37. doi: 10.1186/s40168-015-0102-9. PubMed PMID: 26334878; PubMed Central PMCID: PMC4558878.

Giacomin P, Zakrzewski M, Croese J, Su X, Sotillo J, McCann L, Navarro S, Mitreva M, Krause L, Loukas A, Cantacessi C. Experimental hookworm infection and escalating gluten challenges are associated with increased microbial richness in celiac subjects. Sci Rep. 2015 Sep 18;5:13797. doi: 10.1038/srep13797. PubMed PMID: 26381211; PubMed Central PMCID: PMC4585380.

Wang Q, Rosa BA, Nare B, Powell K, Valente S, Rotili D, Mai A, Marshall GR, Mitreva M. Targeting Lysine Deacetylases (KDACs) in Parasites. PLoS Negl Trop Dis. 2015 Sep 24;9(9):e0004026. doi: 10.1371/journal.pntd.0004026. eCollection 2015. PubMed PMID: 26402733; PubMed Central PMCID: PMC4581690.

Wang Q, Rosa BA, Jasmer DP, Mitreva M. Pan-Nematoda Transcriptomic Elucidation of Essential Intestinal Functions and Therapeutic Targets With Broad Potential. EBioMedicine. 2015 Jul 29;2(9):1079-89. doi: 10.1016/j.ebiom.2015.07.030. eCollection 2015 Sep. PubMed PMID: 26501106; PubMed Central PMCID: PMC4587998.

Davis C, Kota K, Baldhandapani V, Gong W, Abubucker S, Becker E, Martin J, Wylie KM, Khetani R, Hudson ME, Weinstock GM, Mitreva M. mBLAST: Keeping up with the sequencing explosion for (meta)genome analysis. J Data Mining Genomics Proteomics. 2015 Aug;4(3). pii: 135. Epub 2013 Jul 31. PubMed PMID: 26500804; PubMed Central PMCID: PMC4612494.

Wylie TN, Wylie KM, Buller RS, Cannella M, Storch GA. Development and Evaluation of an Enterovirus D68 Real-Time Reverse Transcriptase PCR Assay. J Clin Microbiol. 2015 Aug;53(8):2641-7. doi: 10.1128/JCM.00923-15. Epub 2015 Jun 10. PubMed PMID: 26063859; PubMed Central PMCID: PMC4508392.

Ahmad FA, Storch GA, Miller AS. Impact of an Institutional Guideline on the Care of Neonates at Risk for Herpes Simplex Virus in the Emergency Department. Pediatr Emerg Care. 2015 Aug 21. [Epub ahead of print] PubMed PMID: 26308608.

Qin X, Klein EJ, Galanakis E, Thomas AA, Stapp JR, Rich S, Buccat AM, Tarr PI. Real-Time PCR Assay for Detection and Differentiation of Shiga Toxin-Producing Escherichia coli from Clinical Samples. J Clin Microbiol. 2015 Jul;53(7):2148-53. doi: 10.1128/JCM.00115-15. Epub 2015 Apr 29. PubMed PMID: 25926491; PubMed Central PMCID: PMC4473226.

Moore AM, Ahmadi S, Patel S, Gibson MK, Wang B, Ndao IM, Deych E, Shannon W, Tarr PI, Warner BB, Dantas G. Erratum: Gut resistome development in healthy twin pairs in the first year of life. Microbiome. 2015 Jul 23;3:29. doi: 10.1186/s40168-015-0095-4. eCollection 2015. PubMed PMID: 26207183; PubMed Central PMCID: PMC4511998.

Yahathugoda TC, Supali T, Rao RU, Djuardi Y, Stefani D, Pical F, Fischer PU, Lloyd MM, Premaratne PH, Weerasooriya MV, Weil GJ. A comparison of two tests for filarial antigenemia in areas in Sri Lanka and Indonesia with low-level persistence of lymphatic filariasis following mass drug administration. Parasit Vectors. 2015 Jul 15;8:369. doi: 10.1186/s13071-015-0979-y. PubMed PMID: 26168919; PubMed Central PMCID: PMC4501213.

Fischer PU, Weil GJ. North American paragonimiasis: epidemiology and diagnostic strategies. Expert Rev Anti Infect Ther. 2015 Jun;13(6):779-86. doi: 10.1586/14787210.2015.1031745. Epub 2015 Apr 3. Review. PubMed PMID: 25835312.

VanDussen KL, Marinshaw JM, Shaikh N, Miyoshi H, Moon C, Tarr PI, Ciorba MA, Stappenbeck TS. Development of an enhanced human gastrointestinal epithelial culture system to facilitate patient-based assays. Gut. 2015 Jun;64(6):911-20. doi: 10.1136/gutjnl-2013-306651. Epub 2014 Jul 9. PubMed PMID: 25007816; PubMed Central PMCID: PMC4305344.

Zhang Y, Rowehl L, Krumsiek JM, Orner EP, Shaikh N, Tarr PI, Sodergren E, Weinstock GM, Boedeker EC, Xiong X, Parkinson J, Frank DN, Li E, Gathungu G. Identification of Candidate Adherent-Invasive E. coli Signature Transcripts by Genomic/Transcriptomic Analysis. PLoS One. 2015 Jun 30;10(6):e0130902. doi: 10.1371/journal.pone.0130902. eCollection 2015. Erratum in: PLoS One. 2015;10(7):e0134759. PubMed PMID: 26125937; PubMed Central PMCID: PMC4509574.

Nobel YR, Cox LM, Kirigin FF, Bokulich NA, Yamanishi S, Teitler I, Chung J, Sohn J, Barber CM, Goldfarb DS, Raju K, Abubucker S, Zhou Y, Ruiz VE, Li H, Mitreva M, Alekseyenko AV, Weinstock GM, Sodergren E, Blaser MJ. Metabolic and metagenomic outcomes from early-life pulsed antibiotic treatment. Nat Commun. 2015 Jun 30;6:7486. doi: 10.1038/ncomms8486. PubMed PMID: 26123276; PubMed Central PMCID: PMC4491183.

Lloyd MM, Gilbert R, Taha NT, Weil GJ, Meite A, Kouakou IM, Fischer PU. Conventional parasitology and DNA-based diagnostic methods for onchocerciasis elimination programmes. Acta Trop. 2015 Jun;146:114-8. doi: 10.1016/j.actatropica.2015.03.019. Epub 2015 Mar 25. PubMed PMID: 25818324.

Moore AM, Ahmadi S, Patel S, Gibson MK, Wang B, Ndao MI, Deych E, Shannon W, Tarr PI, Warner BB, Dantas G. Gut resistome development in healthy twin pairs in the first year of life. Microbiome. 2015 Jun 25;3:27. doi: 10.1186/s40168-015-0090-9. eCollection 2015. Erratum in: Microbiome. 2015;3:29. PubMed PMID: 26113976; PubMed Central PMCID: PMC4480905.

Pion SD, Chesnais CB, Bopda J, Louya F, Fischer PU, Majewski AC, Weil GJ, Boussinesq M, Missamou F. The impact of two semiannual treatments with albendazole alone on lymphatic filariasis and soil-transmitted helminth infections: a community-based study in the Republic of Congo. Am J Trop Med Hyg. 2015 May;92(5):959-66. doi: 10.4269/ajtmh.14-0661. Epub 2015 Mar 9. PubMed PMID: 25758650; PubMed Central PMCID: PMC4426585.

Tyagi R, Rosa BA, Lewis WG, Mitreva M. Pan-phylum Comparison of Nematode Metabolic Potential. PLoS Negl Trop Dis. 2015 May 22;9(5):e0003788. doi: 10.1371/journal.pntd.0003788. eCollection 2015 May. PubMed PMID: 26000881; PubMed Central PMCID: PMC4441503.

Rosa BA, Townsend R, Jasmer DP, Mitreva M. Functional and phylogenetic characterization of proteins detected in various nematode intestinal compartments. Mol Cell Proteomics. 2015 Apr;14(4):812-27. doi: 10.1074/mcp.M114.046227. Epub 2015 Jan 21. PubMed PMID: 25609831; PubMed Central PMCID: PMC4390262.

Kuczius T, Zhang W, Merkel V, Mellmann A, Tarr PI, Karch H. Agitation down-regulates immunoglobulin binding protein EibG expression in Shiga toxin-producing Escherichia coli (STEC). PLoS One. 2015 Mar 6;10(3):e0119583. doi: 10.1371/journal.pone.0119583. eCollection 2015. PubMed PMID: 25746924; PubMed Central PMCID: PMC4352079.

Shi B, Chang M, Martin J, Mitreva M, Lux R, Klokkevold P, Sodergren E, Weinstock GM, Haake SK, Li H. Dynamic changes in the subgingival microbiome and their potential for diagnosis and prognosis of periodontitis. MBio. 2015 Feb 17;6(1):e01926-14. doi: 10.1128/mBio.01926-14. PubMed PMID: 25691586; PubMed Central PMCID: PMC4337560.

Jasmer DP, Rosa BA, Mitreva M. Peptidases compartmentalized to the Ascaris suum intestinal lumen and apical intestinal membrane. PLoS Negl Trop Dis. 2015 Jan 8;9(1):e3375. doi: 10.1371/journal.pntd.0003375. eCollection 2015 Jan. PubMed PMID: 25569475; PubMed Central PMCID: PMC4287503.

Martin J, Rosa BA, Ozersky P, Hallsworth-Pepin K, Zhang X, Bhonagiri-Palsikar V, Tyagi R, Wang Q, Choi YJ, Gao X, McNulty SN, Brindley PJ, Mitreva M. Helminth.net: expansions to Nematode.net and an introduction to Trematode.net. Nucleic Acids Res. 2015 Jan;43(Database issue):D698-706. doi: 10.1093/nar/gku1128. Epub 2014 Nov 11. PubMed PMID: 25392426; PubMed Central PMCID: PMC4383941.

Sommovilla J, Zhou Y, Sun RC, Choi PM, Diaz-Miron J, Shaikh N, Sodergren E, Warner BB, Weinstock GM, Tarr PI, Warner BW. Small bowel resection induces long-term changes in the enteric microbiota of mice. J Gastrointest Surg. 2015 Jan;19(1):56-64; discussion 64. doi: 10.1007/s11605-014-2631-0. Epub 2014 Sep 3. PubMed PMID: 25183407; PubMed Central PMCID: PMC4576885.

Rao RU, Nagodavithana KC, Samarasekera SD, Wijegunawardana AD, Premakumara WD, Perera SN, Settinayake S, Miller JP, Weil GJ. A comprehensive assessment of lymphatic filariasis in Sri Lanka six years after cessation of mass drug administration. PLoS Negl Trop Dis. 2014 Nov 13;8(11):e3281. doi: 10.1371/journal.pntd.0003281. eCollection 2014. Erratum in: PLoS Negl Trop Dis. 2014 Dec;(12):e3428. PubMed PMID: 25393404; PubMed Central PMCID: PMC4230885.

La Rosa PS, Warner BB, Zhou Y, Weinstock GM, Sodergren E, Hall-Moore CM, Stevens HJ, Bennett WE Jr, Shaikh N, Linneman LA, Hoffmann JA, Hamvas A, Deych E, Shands BA, Shannon WD, Tarr PI. Patterned progression of bacterial populations in the premature infant gut. Proc Natl Acad Sci U S A. 2014 Aug 26;111(34):12522-7. doi: 10.1073/pnas.1409497111. Epub 2014 Aug 11. Erratum in: Proc Natl Acad Sci U S A. 2014 Dec 2;111(48):17336. PubMed PMID: 25114261; PubMed Central PMCID: PMC4151715.

Bakajika DK, Nigo MM, Lotsima JP, Masikini GA, Fischer K, Lloyd MM, Weil GJ, Fischer PU. Filarial antigenemia and Loa loa night blood microfilaremia in an area without bancroftian filariasis in the Democratic Republic of Congo. Am J Trop Med Hyg. 2014 Dec;91(6):1142-8. doi: 10.4269/ajtmh.14-0358. Epub 2014 Sep 15. PubMed PMID: 25223938; PubMed Central PMCID: PMC4257636.

Zhou Y, Burnham CA, Hink T, Chen L, Shaikh N, Wollam A, Sodergren E, Weinstock GM, Tarr PI, Dubberke ER. Phenotypic and genotypic analysis of Clostridium difficile isolates: a single-center study. J Clin Microbiol. 2014 Dec;52(12):4260-6. doi: 10.1128/JCM.02115-14. Epub 2014 Oct 1. PubMed PMID: 25275005; PubMed Central PMCID: PMC4313296.

Denno DM, VanBuskirk K, Nelson ZC, Musser CA, Hay Burgess DC, Tarr PI. Use of the lactulose to mannitol ratio to evaluate childhood environmental enteric dysfunction: a systematic review. Clin Infect Dis. 2014 Nov 1;59 Suppl 4:S213-9. doi: 10.1093/cid/ciu541. Review. PubMed PMID: 25305289.

Keusch GT, Denno DM, Black RE, Duggan C, Guerrant RL, Lavery JV, Nataro JP, Rosenberg IH, Ryan ET, Tarr PI, Ward H, Bhutta ZA, Coovadia H, Lima A, Ramakrishna B, Zaidi AK, Hay Burgess DC, Brewer T. Environmental enteric dysfunction: pathogenesis, diagnosis, and clinical consequences. Clin Infect Dis. 2014 Nov 1;59 Suppl 4:S207-12. doi: 10.1093/cid/ciu485. Review. PubMed PMID: 25305288; PubMed Central PMCID: PMC4481570.

Cantacessi C, Giacomin P, Croese J, Zakrzewski M, Sotillo J, McCann L, Nolan MJ, Mitreva M, Krause L, Loukas A. Impact of experimental hookworm infection on the human gut microbiota. J Infect Dis. 2014 Nov 1;210(9):1431-4. doi: 10.1093/infdis/jiu256. Epub 2014 May 3. PubMed PMID: 24795483; PubMed Central PMCID: PMC4195438.

Schindler EI, Sellenriek P, Storch GA, Tarr PI, Burnham CA. Shiga toxin-producing Escherichia coli: a single-center, 11-year pediatric experience. J Clin Microbiol. 2014 Oct;52(10):3647-53. doi: 10.1128/JCM.01231-14. Epub 2014 Jul 30. PubMed PMID: 25078916; PubMed Central PMCID: PMC4187762.

McNulty SN, Fischer PU, Townsend RR, Curtis KC, Weil GJ, Mitreva M. Systems biology studies of adult paragonimus lung flukes facilitate the identification of immunodominant parasite antigens. PLoS Negl Trop Dis. 2014 Oct 16;8(10):e3242. doi: 10.1371/journal.pntd.0003242. eCollection 2014 Oct. PubMed PMID: 25329661; PubMed Central PMCID: PMC4199545.

Sotillo J, Sanchez-Flores A, Cantacessi C, Harcus Y, Pickering D, Bouchery T, Camberis M, Tang SC, Giacomin P, Mulvenna J, Mitreva M, Berriman M, LeGros G, Maizels RM, Loukas A. Secreted proteomes of different developmental stages of the gastrointestinal nematode Nippostrongylus brasiliensis. Mol Cell Proteomics. 2014 Oct;13(10):2736-51. doi: 10.1074/mcp.M114.038950. Epub 2014 Jul 3. PubMed PMID: 24994561; PubMed Central PMCID: PMC4188999.

Ondrovics M, Silbermayr K, Mitreva M, Young ND, Gasser RB, Joachim A. Proteomics elucidates key molecules involved in exsheathment in vitro in Oesophagostomum dentatum. Int J Parasitol. 2014 Oct 1;44(11):759-64. doi: 10.1016/j.ijpara.2014.06.003. Epub 2014 Jul 15. PubMed PMID: 25036992; PubMed Central PMCID: PMC4249666.

Donia MS, Cimermancic P, Schulze CJ, Wieland Brown LC, Martin J, Mitreva M, Clardy J, Linington RG, Fischbach MA. A systematic analysis of biosynthetic gene clusters in the human microbiome reveals a common family of antibiotics. Cell. 2014 Sep 11;158(6):1402-14. doi: 10.1016/j.cell.2014.08.032. PubMed PMID: 25215495; PubMed Central PMCID: PMC4164201.

Al-Zubeidi D, Thangarajh M, Pathak S, Cai C, Schlaggar BL, Storch GA, Grange DK, Watson ME Jr. Fatal human herpesvirus 6-associated encephalitis in two boys with underlying POLG mitochondrial disorders. Pediatr Neurol. 2014 Sep;51(3):448-52. doi: 10.1016/j.pediatrneurol.2014.04.006. Epub 2014 Apr 13. PubMed PMID: 25160553.

Holtz LR, Tarr PI. Unexplained benefits of antibiotics in childhood: empiricism in need of enlightenment. J Infect Dis. 2014 Aug 15;210(4):514-6. doi: 10.1093/infdis/jiu172. Epub 2014 Mar 20. PubMed PMID: 24652497.

Li BW, Rush AC, Weil GJ. High level expression of a glutamate-gated chloride channel gene in reproductive tissues of Brugia malayi may explain the sterilizing effect of ivermectin on filarial worms. Int J Parasitol Drugs Drug Resist. 2014 Jan 31;4(2):71-6. doi: 10.1016/j.ijpddr.2014.01.002. eCollection 2014 Aug. PubMed PMID: 25057456; PubMed Central PMCID: PMC4095040.

Lee J, Storch GA. Characterization of human coronavirus OC43 and human coronavirus NL63 infections among hospitalized children <5 years of age. Pediatr Infect Dis J. 2014 Aug;33(8):814-20. doi: 10.1097/INF.0000000000000292. PubMed PMID: 24577040.
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Kraal L, Abubucker S, Kota K, Fischbach MA, Mitreva M. The prevalence of species and strains in the human microbiome: a resource for experimental efforts. PLoS One. 2014 May 14;9(5):e97279. doi: 10.1371/journal.pone.0097279. eCollection 2014. PubMed PMID: 24827833; PubMed Central PMCID: PMC4020798.

Carl MA, Ndao IM, Springman AC, Manning SD, Johnson JR, Johnston BD, Burnham CA, Weinstock ES, Weinstock GM, Wylie TN, Mitreva M, Abubucker S, Zhou Y, Stevens HJ, Hall-Moore C, Julian S, Shaikh N, Warner BB, Tarr PI. Sepsis from the gut: the enteric habitat of bacteria that cause late-onset neonatal bloodstream infections. Clin Infect Dis. 2014 May;58(9):1211-8. doi: 10.1093/cid/ciu084. Epub 2014 Mar 18. PubMed PMID: 24647013; PubMed Central PMCID: PMC3982840.

Abubucker S, McNulty SN, Rosa BA, Mitreva M. Identification and characterization of alternative splicing in parasitic nematode transcriptomes. Parasit Vectors. 2014 Apr 1;7:151. doi: 10.1186/1756-3305-7-151. PubMed PMID: 24690220; PubMed Central PMCID: PMC3997825.

Gunawardena S, Gunawardena NK, Kahathuduwa G, Karunaweera ND, de Silva NR, Ranasinghe UB, Samarasekara SD, Nagodavithana KC, Rao RU, Rebollo MP, Weil GJ. Integrated school-based surveillance for soil-transmitted helminth infections and lymphatic filariasis in Gampaha district, Sri Lanka. Am J Trop Med Hyg. 2014 Apr;90(4):661-6. doi: 10.4269/ajtmh.13-0641. Epub 2014 Feb 3. PubMed PMID: 24493672; PubMed Central PMCID: PMC3973510.

Tang YT, Gao X, Rosa BA, Abubucker S, Hallsworth-Pepin K, Martin J, Tyagi R, Heizer E, Zhang X, Bhonagiri-Palsikar V, Minx P, Warren WC, Wang Q, Zhan B, Hotez PJ, Sternberg PW, Dougall A, Gaze ST, Mulvenna J, Sotillo J, Ranganathan S, Rabelo EM, Wilson RK, Felgner PL, Bethony J, Hawdon JM, Gasser RB, Loukas A, Mitreva M. Genome of the human hookworm Necator americanus. Nat Genet. 2014 Mar;46(3):261-9. doi: 10.1038/ng.2875. Epub 2014 Jan 19. PubMed PMID: 24441737; PubMed Central PMCID: PMC3978129.

Mangiola S, Young ND, Sternberg PW, Strube C, Korhonen PK, Mitreva M, Scheerlinck JP, Hofmann A, Jex AR, Gasser RB. Analysis of the transcriptome of adult Dictyocaulus filaria and comparison with Dictyocaulus viviparus, with a focus on molecules involved in host-parasite interactions. Int J Parasitol. 2014 Mar;44(3-4):251-61. doi: 10.1016/j.ijpara.2013.12.003. Epub 2014 Jan 31. PubMed PMID: 24487001; PubMed Central PMCID: PMC4040346.

Rosa BA, Jasmer DP, Mitreva M. Genome-wide tissue-specific gene expression, co-expression and regulation of co-expressed genes in adult nematode Ascaris suum. PLoS Negl Trop Dis. 2014 Feb 6;8(2):e2678. doi: 10.1371/journal.pntd.0002678. eCollection 2014 Feb. PubMed PMID: 24516681; PubMed Central PMCID: PMC3916258.

Fischer K, Beatty WL, Weil GJ, Fischer PU. High pressure freezing/freeze substitution fixation improves the ultrastructural assessment of Wolbachia endosymbiont-filarial nematode host interaction. PLoS One. 2014 Jan 17;9(1):e86383. doi: 10.1371/journal.pone.0086383. eCollection 2014. PubMed PMID: 24466066; PubMed Central PMCID: PMC3895037.

El Feghaly RE, Stauber JL, Tarr PI, Haslam DB. Intestinal inflammatory biomarkers and outcome in pediatric Clostridium difficile infections. J Pediatr. 2013 Dec;163(6):1697-1704.e2. doi: 10.1016/j.jpeds.2013.07.029. Epub 2013 Sep 4. PubMed PMID: 24011765; PubMed Central PMCID: PMC4098967.

El Feghaly RE, Stauber JL, Tarr PI, Haslam DB. Viral co-infections are common and are associated with higher bacterial burden in children with clostridium difficile infection. J Pediatr Gastroenterol Nutr. 2013 Dec;57(6):813-6. doi: 10.1097/MPG.0b013e3182a3202f. PubMed PMID: 23838821; PubMed Central PMCID: PMC4098970.

Krentel A, Fischer PU, Weil GJ. A review of factors that influence individual compliance with mass drug administration for elimination of lymphatic filariasis. PLoS Negl Trop Dis. 2013 Nov 21;7(11):e2447. doi: 10.1371/journal.pntd.0002447. eCollection 2013 Nov. Review. PubMed PMID: 24278486; PubMed Central PMCID: PMC3836848.

Gurnee EA, Ndao IM, McGhee JE, Warner BB, Tarr PI, Fritz SA, Burnham CA. Fecal carriage of methicillin-resistant Staphylococcus aureus and vancomycin-resistant Enterococcus in healthy children. Antimicrob Agents Chemother. 2014;58(2):1261-2. doi: 10.1128/AAC.02466-13. Epub 2013 Nov 25. PubMed PMID: 24277049; PubMed Central PMCID: PMC3910844.

Moore AM, Patel S, Forsberg KJ, Wang B, Bentley G, Razia Y, Qin X, Tarr PI, Dantas G. Pediatric fecal microbiota harbor diverse and novel antibiotic resistance genes. PLoS One. 2013 Nov 13;8(11):e78822. doi: 10.1371/journal.pone.0078822. eCollection 2013. PubMed PMID: 24236055; PubMed Central PMCID: PMC3827270.

Henry TS, Lane MA, Weil GJ, Bailey TC, Bhalla S. Chest CT features of North American paragonimiasis. AJR Am J Roentgenol. 2012 May;198(5):1076-83. doi: 10.2214/AJR.11.7530. Erratum in: AJR Am J Roentgenol. 2013 Nov;201(5):1165. PubMed PMID: 22528896; PubMed Central PMCID: PMC3832351.

Wendl MC, Kota K, Weinstock GM, Mitreva M. Coverage theories for metagenomic DNA sequencing based on a generalization of Stevens’ theorem. J Math Biol. 2013 Nov;67(5):1141-61. doi: 10.1007/s00285-012-0586-x. Epub 2012 Sep 11. PubMed PMID: 22965653; PubMed Central PMCID: PMC3795925.

Chesnais CB, Missamou F, Pion SD, Bopda J, Louya F, Majewski AC, Weil GJ, Boussinesq M. Semi-quantitative scoring of an immunochromatographic test for circulating filarial antigen. Am J Trop Med Hyg. 2013 Nov;89(5):916-8. doi: 10.4269/ajtmh.13-0245. Epub 2013 Sep 9. PubMed PMID: 24019435; PubMed Central PMCID: PMC3820335.

Schnadower D, Tarr PI, Gorelick MH, O’Connell K, Roskind CG, Powell EC, Rao J, Bhatt S, Freedman SB. Validation of the modified Vesikari score in children with gastroenteritis in 5 US emergency departments. J Pediatr Gastroenterol Nutr. 2013 Oct;57(4):514-9. doi: 10.1097/MPG.0b013e31829ae5a3. PubMed PMID: 23676445; PubMed Central PMCID: PMC3788842.

Davis TK, McKee R, Schnadower D, Tarr PI. Treatment of Shiga toxin-producing Escherichia coli infections. Infect Dis Clin North Am. 2013 Sep;27(3):577-97. doi: 10.1016/j.idc.2013.05.010. Epub 2013 Jul 24. Review. PubMed PMID: 24011831.

Taylor CM, Wang Q, Rosa BA, Huang SC, Powell K, Schedl T, Pearce EJ, Abubucker S, Mitreva M. Discovery of anthelmintic drug targets and drugs using chokepoints in nematode metabolic pathways. PLoS Pathog. 2013;9(8):e1003505. doi: 10.1371/journal.ppat.1003505. Epub 2013 Aug 1. PubMed PMID: 23935495; PubMed Central PMCID: PMC3731235.

Wylie KM, Weinstock GM, Storch GA. Virome genomics: a tool for defining the human virome. Curr Opin Microbiol. 2013 Aug;16(4):479-84. doi: 10.1016/j.mib.2013.04.006. Epub 2013 May 23. Review. PubMed PMID: 23706900; PubMed Central PMCID: PMC3755052.

Weil GJ, Curtis KC, Fakoli L, Fischer K, Gankpala L, Lammie PJ, Majewski AC, Pelletreau S, Won KY, Bolay FK, Fischer PU. Laboratory and field evaluation of a new rapid test for detecting Wuchereria bancrofti antigen in human blood. Am J Trop Med Hyg. 2013 Jul;89(1):11-5. doi: 10.4269/ajtmh.13-0089. Epub 2013 May 20. PubMed PMID: 23690552; PubMed Central PMCID: PMC3748464.

Hu X, Yu J, Crosby SD, Storch GA. Gene expression profiles in febrile children with defined viral and bacterial infection. Proc Natl Acad Sci U S A. 2013 Jul 30;110(31):12792-7. doi: 10.1073/pnas.1302968110. Epub 2013 Jul 15. PubMed PMID: 23858444; PubMed Central PMCID: PMC3732941.

El Feghaly RE, Stauber JL, Deych E, Gonzalez C, Tarr PI, Haslam DB. Markers of intestinal inflammation, not bacterial burden, correlate with clinical outcomes in Clostridium difficile infection. Clin Infect Dis. 2013 Jun;56(12):1713-21. doi: 10.1093/cid/cit147. Epub 2013 Mar 13. PubMed PMID: 23487367; PubMed Central PMCID: PMC3707425.

Fischer PU, Curtis KC, Folk SM, Wilkins PP, Marcos LA, Weil GJ. Serological diagnosis of North American Paragonimiasis by Western blot using Paragonimus kellicotti adult worm antigen. Am J Trop Med Hyg. 2013 Jun;88(6):1035-40. doi: 10.4269/ajtmh.12-0720. Epub 2013 Apr 15. PubMed PMID: 23589531; PubMed Central PMCID: PMC3752799.

Wang Z, Gao X, Martin J, Yin Y, Abubucker S, Rash AC, Li BW, Nash B, Hallsworth-Pepin K, Jasmer DP, Mitreva M. Gene expression analysis distinguishes tissue-specific and gender-related functions among adult Ascaris suum tissues. Mol Genet Genomics. 2013 Jun;288(5-6):243-60. doi: 10.1007/s00438-013-0743-y. Epub 2013 Apr 10. PubMed PMID: 23572074; PubMed Central PMCID: PMC3670759.

McNulty SN, Mitreva M, Weil GJ, Fischer PU. Inter and intra-specific diversity of parasites that cause lymphatic filariasis. Infect Genet Evol. 2013 Mar;14:137-46. doi: 10.1016/j.meegid.2012.11.002. Epub 2012 Nov 29. Review. PubMed PMID: 23201850; PubMed Central PMCID: PMC3801268.

Taylor CM, Martin J, Rao RU, Powell K, Abubucker S, Mitreva M. Using existing drugs as leads for broad spectrum anthelmintics targeting protein kinases. PLoS Pathog. 2013 Feb;9(2):e1003149. doi: 10.1371/journal.ppat.1003149. Epub 2013 Feb 14. PubMed PMID: 23459584; PubMed Central PMCID: PMC3573124.

Heizer E, Zarlenga DS, Rosa B, Gao X, Gasser RB, De Graef J, Geldhof P, Mitreva M. Transcriptome analyses reveal protein and domain families that delineate stage-related development in the economically important parasitic nematodes, Ostertagia ostertagi and Cooperia oncophora. BMC Genomics. 2013 Feb 22;14:118. doi: 10.1186/1471-2164-14-118. PubMed PMID: 23432754; PubMed Central PMCID: PMC3599158.

Agapova S, Stephenson K, Manary M, Weisz A, Tarr PI, Mkakosya R, Maleta K, Shulman RJ, Manary M, Shaikh N. Detection of low-concentration host mRNA transcripts in Malawian children at risk for environmental enteropathy. J Pediatr Gastroenterol Nutr. 2013 Jan;56(1):66-71. doi: 10.1097/MPG.0b013e31826a107a. PubMed PMID: 22832511.

Saito JM, Yan Y, Evashwick TW, Warner BW, Tarr PI. Use and accuracy of diagnostic imaging by hospital type in pediatric appendicitis. Pediatrics. 2013 Jan;131(1):e37-44. doi: 10.1542/peds.2012-1665. Epub 2012 Dec 24. PubMed PMID: 23266930; PubMed Central PMCID: PMC3529953.

McNulty SN, Fischer K, Curtis KC, Weil GJ, Brattig NW, Fischer PU. Localization of Wolbachia-like gene transcripts and peptides in adult Onchocerca flexuosa worms indicates tissue specific expression. Parasit Vectors. 2013 Jan 2;6:2. doi: 10.1186/1756-3305-6-2. PubMed PMID: 23281896; PubMed Central PMCID: PMC3549793.

Colvin JM, Muenzer JT, Jaffe DM, Smason A, Deych E, Shannon WD, Arens MQ, Buller RS, Lee WM, Weinstock EJ, Weinstock GM, Storch GA. Detection of viruses in young children with fever without an apparent source. Pediatrics. 2012 Dec;130(6):e1455-62. doi: 10.1542/peds.2012-1391. Epub 2012 Nov 5. PubMed PMID: 23129086; PubMed Central PMCID: PMC3507256.

McElvania TeKippe E, Wylie KM, Deych E, Sodergren E, Weinstock G, Storch GA. Increased prevalence of anellovirus in pediatric patients with fever. PLoS One. 2012;7(11):e50937. doi: 10.1371/journal.pone.0050937. Epub 2012 Nov 30. PubMed PMID: 23226428; PubMed Central PMCID: PMC3511395.

Denno DM, Shaikh N, Stapp JR, Qin X, Hutter CM, Hoffman V, Mooney JC, Wood KM, Stevens HJ, Jones R, Tarr PI, Klein EJ. Diarrhea etiology in a pediatric emergency department: a case control study. Clin Infect Dis. 2012 Oct;55(7):897-904. doi: 10.1093/cid/cis553. Epub 2012 Jun 14. PubMed PMID: 22700832; PubMed Central PMCID: PMC3657524.

Wylie KM, Weinstock GM, Storch GA. Emerging view of the human virome. Transl Res. 2012 Oct;160(4):283-90. doi: 10.1016/j.trsl.2012.03.006. Epub 2012 Apr 24. Review. PubMed PMID: 22683423; PubMed Central PMCID: PMC3701101.

McNulty SN, Abubucker S, Simon GM, Mitreva M, McNulty NP, Fischer K, Curtis KC, Brattig NW, Weil GJ, Fischer PU. Transcriptomic and proteomic analyses of a Wolbachia-free filarial parasite provide evidence of trans-kingdom horizontal gene transfer. PLoS One. 2012;7(9):e45777. doi: 10.1371/journal.pone.0045777. Epub 2012 Sep 26. PubMed PMID: 23049857; PubMed Central PMCID: PMC3458923.

Marcos LA, Arrospide N, Recuenco S, Cabezas C, Weil GJ, Fischer PU. Genetic characterization of atypical Mansonella (Mansonella) ozzardi microfilariae in human blood samples from northeastern Peru. Am J Trop Med Hyg. 2012 Sep;87(3):491-4. doi: 10.4269/ajtmh.2012.11-0379. Epub 2012 Jul 23. PubMed PMID: 22826497; PubMed Central PMCID: PMC3435353.

Jiang D, Malone J, Townsend R, Weil GJ, Li B. Multiplex proteomics analysis of gender-associated proteins in Brugia malayi. Int J Parasitol. 2012 Aug;42(9):841-50. doi: 10.1016/j.ijpara.2012.06.004. Epub 2012 Jul 20. PubMed PMID: 22819962; PubMed Central PMCID: PMC4901520.

Lane MA, Marcos LA, Onen NF, Demertzis LM, Hayes EV, Davila SZ, Nurutdinova DR, Bailey TC, Weil GJ. Paragonimus kellicotti flukes in Missouri, USA. Emerg Infect Dis. 2012 Aug;18(8):1263-7. doi: 10.3201/eid1808.120335. PubMed PMID: 22840191; PubMed Central PMCID: PMC3414046.

Wang Z, Zarlenga D, Martin J, Abubucker S, Mitreva M. Exploring metazoan evolution through dynamic and holistic changes in protein families and domains. BMC Evol Biol. 2012 Aug 3;12:138. doi: 10.1186/1471-2148-12-138. PubMed PMID: 22862991; PubMed Central PMCID: PMC3483195.

Abubucker S, Segata N, Goll J, Schubert AM, Izard J, Cantarel BL, Rodriguez-Mueller B, Zucker J, Thiagarajan M, Henrissat B, White O, Kelley ST, Methé B, Schloss PD, Gevers D, Mitreva M, Huttenhower C. Metabolic reconstruction for metagenomic data and its application to the human microbiome. PLoS Comput Biol. 2012;8(6):e1002358. doi: 10.1371/journal.pcbi.1002358. Epub 2012 Jun 13. PubMed PMID: 22719234; PubMed Central PMCID: PMC3374609.

Martin J, Sykes S, Young S, Kota K, Sanka R, Sheth N, Orvis J, Sodergren E, Wang Z, Weinstock GM, Mitreva M. Optimizing read mapping to reference genomes to determine composition and species prevalence in microbial communities. PLoS One. 2012;7(6):e36427. doi: 10.1371/journal.pone.0036427. Epub 2012 Jun 13. PubMed PMID: 22719831; PubMed Central PMCID: PMC3374613.

Wylie KM, Mihindukulasuriya KA, Sodergren E, Weinstock GM, Storch GA. Sequence analysis of the human virome in febrile and afebrile children. PLoS One. 2012;7(6):e27735. doi: 10.1371/journal.pone.0027735. Epub 2012 Jun 13. PubMed PMID: 22719819; PubMed Central PMCID: PMC3374612.

Memon IA, Parikh BA, Gaudreault-Keener M, Skelton R, Storch GA, Brennan DC. Progression from Sustained BK Viruria to Sustained BK Viremia with Immunosuppression Reduction Is Not Associated with Changes in the Noncoding Control Region of the BK Virus Genome. J Transplant. 2012;2012:761283. doi: 10.1155/2012/761283. Epub 2012 Jun 4. PubMed PMID: 22701777; PubMed Central PMCID: PMC3373156.

El Feghaly RE, Sutton DA, Thompson EH, Fu J, Wickes BL, Al-Zubeidi D, Storch GA, Burnham CA. Graphium basitruncatum fungemia in an immunosuppressed child post stem-cell transplantation. Med Mycol Case Rep. 2012 May 27;1(1):35-8. doi: 10.1016/j.mmcr.2012.05.003. eCollection 2012. PubMed PMID: 24371733; PubMed Central PMCID: PMC3854641.

Li BW, Wang Z, Rush AC, Mitreva M, Weil GJ. Transcription profiling reveals stage- and function-dependent expression patterns in the filarial nematode Brugia malayi. BMC Genomics. 2012 May 14;13:184. doi: 10.1186/1471-2164-13-184. PubMed PMID: 22583769; PubMed Central PMCID: PMC3414817.

McNulty SN, Mullin AS, Vaughan JA, Tkach VV, Weil GJ, Fischer PU. Comparing the mitochondrial genomes of Wolbachia-dependent and independent filarial nematode species. BMC Genomics. 2012 Apr 24;13:145. doi: 10.1186/1471-2164-13-145. PubMed PMID: 22530989; PubMed Central PMCID: PMC3409033.

Yamada M, Buller R, Bledsoe S, Storch GA. Rising rates of macrolide-resistant Mycoplasma pneumoniae in the central United States. Pediatr Infect Dis J. 2012 Apr;31(4):409-0. doi: 10.1097/INF.0b013e318247f3e0. PubMed PMID: 22209916.

McNulty SN, Fischer K, Mehus JO, Vaughan JA, Tkach VV, Weil GJ, Fischer PU. Absence of Wolbachia endobacteria in Chandlerella quiscali, an avian filarial parasite. J Parasitol. 2012 Apr;98(2):382-7. doi: 10.1645/GE-2879.1. Epub 2011 Oct 27. PubMed PMID: 22032328; PubMed Central PMCID: PMC5000782.

Martin J, Abubucker S, Heizer E, Taylor CM, Mitreva M. Nematode.net update addition of data sets and tools featuring next-generation sequencing data. Nucleic Acids Res. 2012 Jan;40(Database issue):D720-8. doi: 10.1093/nar/gkr1194. Epub 2011 Dec 1. PubMed PMID: 22139919; PubMed Central PMCID: PMC3245159.

Holtz LR, Wylie KM, Sodergren E, Jiang Y, Franz CJ, Weinstock GM, Storch GA, Wang D. Astrovirus MLB2 viremia in febrile child. Emerg Infect Dis. 2011 Nov;17(11):2050-2. doi: 10.3201/eid1711.110496. PubMed PMID: 22099095; PubMed Central PMCID: PMC3310569.

Hickey CA, Beattie TJ, Cowieson J, Miyashita Y, Strife CF, Frem JC, Peterson JM, Butani L, Jones DP, Havens PL, Patel HP, Wong CS, Andreoli SP, Rothbaum RJ, Beck AM, Tarr PI. Early volume expansion during diarrhea and relative nephroprotection during subsequent hemolytic uremic syndrome. Arch Pediatr Adolesc Med. 2011 Oct;165(10):884-9. doi: 10.1001/archpediatrics.2011.152. Epub 2011 Jul 22. PubMed PMID: 21784993; PubMed Central PMCID: PMC4064458.

Fritz SA, Camins BC, Eisenstein KA, Fritz JM, Epplin EK, Burnham CA, Dukes J, Storch GA. Effectiveness of measures to eradicate Staphylococcus aureus carriage in patients with community-associated skin and soft-tissue infections: a randomized trial. Infect Control Hosp Epidemiol. 2011 Sep;32(9):872-80. doi: 10.1086/661285. PubMed PMID: 21828967; PubMed Central PMCID: PMC3528015.

Weil GJ, Curtis KC, Fischer PU, Won KY, Lammie PJ, Joseph H, Melrose WD, Brattig NW. A multicenter evaluation of a new antibody test kit for lymphatic filariasis employing recombinant Brugia malayi antigen Bm-14. Acta Trop. 2011 Sep;120 Suppl 1:S19-22. doi: 10.1016/j.actatropica.2010.04.010. Epub 2010 Apr 27. PubMed PMID: 20430004; PubMed Central PMCID: PMC2935504.

González-Rivera R, Culverhouse RC, Hamvas A, Tarr PI, Warner BB. The age of necrotizing enterocolitis onset: an application of Sartwell’s incubation period model. J Perinatol. 2011 Aug;31(8):519-23. doi: 10.1038/jp.2010.193. Epub 2011 Jan 27. PubMed PMID: 21273988; PubMed Central PMCID: PMC3145821.

Abubucker S, Martin J, Taylor CM, Mitreva M. HelmCoP: an online resource for helminth functional genomics and drug and vaccine targets prioritization. PLoS One. 2011;6(7):e21832. doi: 10.1371/journal.pone.0021832. Epub 2011 Jul 8. PubMed PMID: 21760913; PubMed Central PMCID: PMC3132748.

Watson ME Jr, Storch GA, Dunne WM Jr, Burnham CA. A 2-year-old female with Fever and rash. J Clin Microbiol. 2011 Jul;49(7):2389, 2784. doi: 10.1128/JCM.00081-11. PubMed PMID: 21719732; PubMed Central PMCID: PMC3147883.

Bucher BT, McDuffie LA, Shaikh N, Tarr PI, Warner BB, Hamvas A, White FV, Erwin CR, Warner BW. Bacterial DNA content in the intestinal wall from infants with necrotizing enterocolitis. J Pediatr Surg. 2011 Jun;46(6):1029-33. doi: 10.1016/j.jpedsurg.2011.03.026. PubMed PMID: 21683193; PubMed Central PMCID: PMC3118995.

Fischer PU, Curtis KC, Marcos LA, Weil GJ. Molecular characterization of the North American lung fluke Paragonimus kellicotti in Missouri and its development in Mongolian gerbils. Am J Trop Med Hyg. 2011 Jun;84(6):1005-11. doi: 10.4269/ajtmh.2011.11-0027. PubMed PMID: 21633042; PubMed Central PMCID: PMC3110363.

Leopold SR, Sawyer SA, Whittam TS, Tarr PI. Obscured phylogeny and possible recombinational dormancy in Escherichia coli. BMC Evol Biol. 2011 Jun 27;11:183. doi: 10.1186/1471-2148-11-183. PubMed PMID: 21708031; PubMed Central PMCID: PMC3152902.

Cheng XS, Bohl DL, Storch GA, Ryschkewitsch C, Gaudreault-Keener M, Major EO, Randhawa P, Hardinger KL, Brennan DC. Inhibitory interactions between BK and JC virus among kidney transplant recipients. J Am Soc Nephrol. 2011 May;22(5):825-31. doi: 10.1681/ASN.2010080877. Epub 2011 Apr 21. PubMed PMID: 21511831; PubMed Central PMCID: PMC3269895.

Fischer K, Beatty WL, Jiang D, Weil GJ, Fischer PU. Tissue and stage-specific distribution of Wolbachia in Brugia malayi. PLoS Negl Trop Dis. 2011 May;5(5):e1174. doi: 10.1371/journal.pntd.0001174. Epub 2011 May 24. PubMed PMID: 21629728; PubMed Central PMCID: PMC3101188.

Taylor CM, Fischer K, Abubucker S, Wang Z, Martin J, Jiang D, Magliano M, Rosso MN, Li BW, Fischer PU, Mitreva M. Targeting protein-protein interactions for parasite control. PLoS One. 2011 Apr 27;6(4):e18381. doi: 10.1371/journal.pone.0018381. PubMed PMID: 21556146; PubMed Central PMCID: PMC3083401.

Fritz SA, Krauss MJ, Epplin EK, Burnham CA, Garbutt J, Dunne WM, Hunstad DA, Storch GA. The natural history of contemporary Staphylococcus aureus nasal colonization in community children. Pediatr Infect Dis J. 2011 Apr;30(4):349-51. doi: 10.1097/INF.0b013e3181fe075e. PubMed PMID: 21412205; PubMed Central PMCID: PMC3077955.

Mitreva M, Jasmer DP, Zarlenga DS, Wang Z, Abubucker S, Martin J, Taylor CM, Yin Y, Fulton L, Minx P, Yang SP, Warren WC, Fulton RS, Bhonagiri V, Zhang X, Hallsworth-Pepin K, Clifton SW, McCarter JP, Appleton J, Mardis ER, Wilson RK. The draft genome of the parasitic nematode Trichinella spiralis. Nat Genet. 2011 Mar;43(3):228-35. doi: 10.1038/ng.769. Epub 2011 Feb 20. PubMed PMID: 21336279; PubMed Central PMCID: PMC3057868.

Ye L, Hillier LW, Minx P, Thane N, Locke DP, Martin JC, Chen L, Mitreva M, Miller JR, Haub KV, Dooling DJ, Mardis ER, Wilson RK, Weinstock GM, Warren WC. A vertebrate case study of the quality of assemblies derived from next-generation sequences. Genome Biol. 2011;12(3):R31. doi: 10.1186/gb-2011-12-3-r31. Epub 2011 Mar 31. PubMed PMID: 21453517; PubMed Central PMCID: PMC3129681.

Dubberke ER, Haslam DB, Lanzas C, Bobo LD, Burnham CA, Gröhn YT, Tarr PI. The ecology and pathobiology of Clostridium difficile infections: an interdisciplinary challenge. Zoonoses Public Health. 2011 Feb;58(1):4-20. doi: 10.1111/j.1863-2378.2010.01352.x. Epub 2010 Sep 24. Review. PubMed PMID: 21223531; PubMed Central PMCID: PMC3668351.

Li BW, Rush AC, Jiang DJ, Mitreva M, Abubucker S, Weil GJ. Gender-associated genes in filarial nematodes are important for reproduction and potential intervention targets. PLoS Negl Trop Dis. 2011 Jan 25;5(1):e947. doi: 10.1371/journal.pntd.0000947. PubMed PMID: 21283610; PubMed Central PMCID: PMC3026763.

Locke DP, Hillier LW, Warren WC, Worley KC, Nazareth LV, Muzny DM, Yang SP, Wang Z, Chinwalla AT, Minx P, Mitreva M, Cook L, Delehaunty KD, Fronick C, Schmidt H, Fulton LA, Fulton RS, Nelson JO, Magrini V, Pohl C, Graves TA, Markovic C, Cree A, Dinh HH, Hume J, Kovar CL, Fowler GR, Lunter G, Meader S, Heger A, Ponting CP, Marques-Bonet T, Alkan C, Chen L, Cheng Z, Kidd JM, Eichler EE, White S, Searle S, Vilella AJ, Chen Y, Flicek P, Ma J, Raney B, Suh B, Burhans R, Herrero J, Haussler D, Faria R, Fernando O, Darré F, Farré D, Gazave E, Oliva M, Navarro A, Roberto R, Capozzi O, Archidiacono N, Della Valle G, Purgato S, Rocchi M, Konkel MK, Walker JA, Ullmer B, Batzer MA, Smit AF, Hubley R, Casola C, Schrider DR, Hahn MW, Quesada V, Puente XS, Ordoñez GR, López-Otín C, Vinar T, Brejova B, Ratan A, Harris RS, Miller W, Kosiol C, Lawson HA, Taliwal V, Martins AL, Siepel A, Roychoudhury A, Ma X, Degenhardt J, Bustamante CD, Gutenkunst RN, Mailund T, Dutheil JY, Hobolth A, Schierup MH, Ryder OA, Yoshinaga Y, de Jong PJ, Weinstock GM, Rogers J, Mardis ER, Gibbs RA, Wilson RK. Comparative and demographic analysis of orang-utan genomes. Nature. 2011 Jan 27;469(7331):529-33. doi: 10.1038/nature09687. PubMed PMID: 21270892; PubMed Central PMCID: PMC3060778.

Leopold SR, Shaikh N, Tarr PI. Further evidence of constrained radiation in the evolution of pathogenic Escherichia coli O157:H7. Infect Genet Evol. 2010 Dec;10(8):1282-5. doi: 10.1016/j.meegid.2010.07.021. Epub 2010 Aug 5. PubMed PMID: 20691811; PubMed Central PMCID: PMC3742067.

Allan BF, Dutra HP, Goessling LS, Barnett K, Chase JM, Marquis RJ, Pang G, Storch GA, Thach RE, Orrock JL. Invasive honeysuckle eradication reduces tick-borne disease risk by altering host dynamics. Proc Natl Acad Sci U S A. 2010 Oct 26;107(43):18523-7. doi: 10.1073/pnas.1008362107. Epub 2010 Oct 11. PubMed PMID: 20937859; PubMed Central PMCID: PMC2973004.

Mitreva M, Jasmer DP. Trichinella spiralis: genomic application to control a zoonotic nematode. Infect Disord Drug Targets. 2010 Oct;10(5):376-84. Review. PubMed PMID: 20701572.

Gao X, Wang Z, Martin J, Abubucker S, Zhang X, Mitreva M, Hawdon JM. Identification of hookworm DAF-16/FOXO response elements and direct gene targets. PLoS One. 2010 Aug 19;5(8):e12289. doi: 10.1371/journal.pone.0012289. PubMed PMID: 20808816; PubMed Central PMCID: PMC2924398.

Spinner ML, Saab G, Casabar E, Bowman LJ, Storch GA, Brennan DC. Impact of prophylactic versus preemptive valganciclovir on long-term renal allograft outcomes. Transplantation. 2010 Aug 27;90(4):412-8. doi: 10.1097/TP.0b013e3181e81afc. PubMed PMID: 20555305; PubMed Central PMCID: PMC2924927.

Sumino KC, Walter MJ, Mikols CL, Thompson SA, Gaudreault-Keener M, Arens MQ, Agapov E, Hormozdi D, Gaynor AM, Holtzman MJ, Storch GA. Detection of respiratory viruses and the associated chemokine responses in serious acute respiratory illness. Thorax. 2010 Jul;65(7):639-44. doi: 10.1136/thx.2009.132480. PubMed PMID: 20627924; PubMed Central PMCID: PMC3018337.

Bennett WE Jr, González-Rivera R, Puente BN, Shaikh N, Stevens HJ, Mooney JC, Klein EJ, Denno DM, Draghi A II, Sylvester FA, Tarr PI. Proinflammatory fecal mRNA and childhood bacterial enteric infections. Gut Microbes. 2010 Jul;1(4):209-212. Epub 2010 Jul 13. PubMed PMID: 21327027; PubMed Central PMCID: PMC3023602.

Arens MQ, Buller RS, Rankin A, Mason S, Whetsell A, Agapov E, Lee WM, Storch GA. Comparison of the Eragen Multi-Code Respiratory Virus Panel with conventional viral testing and real-time multiplex PCR assays for detection of respiratory viruses. J Clin Microbiol. 2010 Jul;48(7):2387-95. doi: 10.1128/JCM.00220-10. Epub 2010 May 19. PubMed PMID: 20484608; PubMed Central PMCID: PMC2897522.

McNulty SN, Foster JM, Mitreva M, Dunning Hotopp JC, Martin J, Fischer K, Wu B, Davis PJ, Kumar S, Brattig NW, Slatko BE, Weil GJ, Fischer PU. Endosymbiont DNA in endobacteria-free filarial nematodes indicates ancient horizontal genetic transfer. PLoS One. 2010 Jun 9;5(6):e11029. doi: 10.1371/journal.pone.0011029. PubMed PMID: 20543958; PubMed Central PMCID: PMC2882956.

Wang Z, Abubucker S, Martin J, Wilson RK, Hawdon J, Mitreva M. Characterizing Ancylostoma caninum transcriptome and exploring nematode parasitic adaptation. BMC Genomics. 2010 May 14;11:307. doi: 10.1186/1471-2164-11-307. PubMed PMID: 20470405; PubMed Central PMCID: PMC2882930.

Hormozdi DJ, Arens MQ, Le BM, Buller RS, Agapov E, Storch GA. KI polyomavirus detected in respiratory tract specimens from patients in St. Louis, Missouri. Pediatr Infect Dis J. 2010 Apr;29(4):329-33. doi: 10.1097/INF.0b013e3181c1795c. PubMed PMID: 19949359.

Allan BF, Goessling LS, Storch GA, Thach RE. Blood meal analysis to identify reservoir hosts for Amblyomma americanum ticks. Emerg Infect Dis. 2010 Mar;16(3):433-40. doi: 10.3201/eid1603.090911. PubMed PMID: 20202418; PubMed Central PMCID: PMC3322017.

Weyher AH, Phillips-Conroy JE, Fischer K, Weil GJ, Chansa W, Fischer PU. Molecular identification of Schistosoma mattheei from feces of Kinda (Papio cynocephalus kindae) and grayfoot baboons (Papio ursinus griseipes) in Zambia. J Parasitol. 2010 Feb;96(1):184-90. doi: 10.1645/GE-2186.1. PubMed PMID: 19697970.

Fritz SA, Epplin EK, Garbutt J, Storch GA. Skin infection in children colonized with community-associated methicillin-resistant Staphylococcus aureus. J Infect. 2009 Dec;59(6):394-401. doi: 10.1016/j.jinf.2009.09.001. Epub 2009 Sep 9. PubMed PMID: 19747505; PubMed Central PMCID: PMC2788074.

Erickson SM, Fischer K, Weil GJ, Christensen BM, Fischer PU. Distribution of Brugia malayi larvae and DNA in vector and non-vector mosquitoes: implications for molecular diagnostics. Parasit Vectors. 2009 Nov 17;2(1):56. doi: 10.1186/1756-3305-2-56. PubMed PMID: 19922607; PubMed Central PMCID: PMC2781795.

Ahn CK, Russo AJ, Howell KR, Holt NJ, Sellenriek PL, Rothbaum RJ, Beck AM, Luebbering LJ, Tarr PI. Deer sausage: a newly identified vehicle of transmission of Escherichia coli O157:H7. J Pediatr. 2009 Oct;155(4):587-9. doi: 10.1016/j.jpeds.2009.02.051. PubMed PMID: 19773004.

Brindley PJ, Mitreva M, Ghedin E, Lustigman S. Helminth genomics: The implications for human health. PLoS Negl Trop Dis. 2009 Oct 26;3(10):e538. doi: 10.1371/journal.pntd.0000538. Review. PubMed PMID: 19855829; PubMed Central PMCID: PMC2757907.

Bennett WE Jr, González-Rivera R, Shaikh N, Magrini V, Boykin M, Warner BB, Hamvas A, Tarr PI. A method for isolating and analyzing human mRNA from newborn stool. J Immunol Methods. 2009 Sep 30;349(1-2):56-60. doi: 10.1016/j.jim.2009.07.013. Epub 2009 Aug 3. PubMed PMID: 19660464; PubMed Central PMCID: PMC2850193.

Lane MA, Barsanti MC, Santos CA, Yeung M, Lubner SJ, Weil GJ. Human paragonimiasis in North America following ingestion of raw crayfish. Clin Infect Dis. 2009 Sep 15;49(6):e55-61. doi: 10.1086/605534. Review. PubMed PMID: 19681705.

Orscheln RC, Hunstad DA, Fritz SA, Loughman JA, Mitchell K, Storch EK, Gaudreault M, Sellenriek PL, Armstrong JR, Mardis ER, Storch GA. contribution of genetically restricted, methicillin-susceptible strains to the ongoing epidemic of community-acquired Staphylococcus aureus infections. Clin Infect Dis. 2009 Aug 15;49(4):536-42. doi: 10.1086/600881. PubMed PMID: 19589082; PubMed Central PMCID: PMC2965061.

Masters EJ, Storch GA, Sumner JW. Ehrlichia ewingii in an immunocompetent adult. Mo Med. 2009 Jul-Aug;106(4):301-3. PubMed PMID: 19753925.

Kuhlmann FM, Weil GJ. Infectious risks for travelers to the tropics. Mo Med. 2009 Jul-Aug;106(4):263-8. PubMed PMID: 19753917.

Lawrence KL, Morrell MR, Storch GA, Hachem RR, Trulock EP. Clinical outcomes of solid organ transplant recipients with ehrlichiosis. Transpl Infect Dis. 2009 Jun;11(3):203-10. doi: 10.1111/j.1399-3062.2009.00373.x. Epub 2009 Feb 18. Review. PubMed PMID: 19228344.

Li BW, Rush AC, Mitreva M, Yin Y, Spiro D, Ghedin E, Weil GJ. Transcriptomes and pathways associated with infectivity, survival and immunogenicity in Brugia malayi L3. BMC Genomics. 2009 Jun 15;10:267. doi: 10.1186/1471-2164-10-267. PubMed PMID: 19527522; PubMed Central PMCID: PMC2708187.

Abubucker S, Zarlenga DS, Martin J, Yin Y, Wang Z, McCarter JP, Gasbarree L, Wilson RK, Mitreva M. The transcriptomes of the cattle parasitic nematode Ostertagia ostartagi. Vet Parasitol. 2009 May 26;162(1-2):89-99. doi: 10.1016/j.vetpar.2009.02.023. Epub 2009 Feb 27. PubMed PMID: 19346077; PubMed Central PMCID: PMC2677129.

Holtz LR, Neill MA, Tarr PI. Acute bloody diarrhea: a medical emergency for patients of all ages. Gastroenterology. 2009 May;136(6):1887-98. doi: 10.1053/j.gastro.2009.02.059. Epub 2009 May 7. Review. PubMed PMID: 19457417.

Leopold SR, Magrini V, Holt NJ, Shaikh N, Mardis ER, Cagno J, Ogura Y, Iguchi A, Hayashi T, Mellmann A, Karch H, Besser TE, Sawyer SA, Whittam TS, Tarr PI. A precise reconstruction of the emergence and constrained radiations of Escherichia coli O157 portrayed by backbone concatenomic analysis. Proc Natl Acad Sci U S A. 2009 May 26;106(21):8713-8. doi: 10.1073/pnas.0812949106. Epub 2009 May 13. PubMed PMID: 19439656; PubMed Central PMCID: PMC2689004.

Rao RU, Huang Y, Bockarie MJ, Susapu M, Laney SJ, Weil GJ. A qPCR-based multiplex assay for the detection of Wuchereria bancrofti, Plasmodium falciparum and Plasmodium vivax DNA. Trans R Soc Trop Med Hyg. 2009 Apr;103(4):365-70. doi: 10.1016/j.trstmh.2008.07.012. Epub 2008 Sep 17. PubMed PMID: 18801545; PubMed Central PMCID: PMC2713189.

Finkbeiner SR, Le BM, Holtz LR, Storch GA, Wang D. Detection of newly described astrovirus MLB1 in stool samples from children. Emerg Infect Dis. 2009 Mar;15(3):441-4. doi: 10.3201/eid1503.081213. PubMed PMID: 19239759; PubMed Central PMCID: PMC2666294.

Yin Y, Martin J, Abubucker S, Wang Z, Wyrwicz L, Rychlewski L, McCarter JP, Wilson RK, Mitreva M. Molecular determinants archetypical to the phylum Nematoda. BMC Genomics. 2009 Mar 18;10:114. doi: 10.1186/1471-2164-10-114. PubMed PMID: 19296854; PubMed Central PMCID: PMC2666764.

Loughman JA, Fritz SA, Storch GA, Hunstad DA. Virulence gene expression in human community-acquired Staphylococcus aureus infection. J Infect Dis. 2009 Feb 1;199(3):294-301. doi: 10.1086/595982. PubMed PMID: 19115951; PubMed Central PMCID: PMC2843142.

Tarr PI. Shiga toxin-associated hemolytic uremic syndrome and thrombotic thrombocytopenic purpura: distinct mechanisms of pathogenesis. Kidney Int Suppl. 2009 Feb;(112):S29-32. doi: 10.1038/ki.2008.615. Review. PubMed PMID: 19180128.

Rao RU, Huang Y, Fischer K, Fischer PU, Weil GJ. Brugia malayi: Effects of nitazoxanide and tizoxanide on adult worms and microfilariae of filarial nematodes. Exp Parasitol. 2009 Jan;121(1):38-45. doi: 10.1016/j.exppara.2008.09.020. Epub 2008 Oct 17. PubMed PMID: 18977224.

Martin J, Abubucker S, Wylie T, Yin Y, Wang Z, Mitreva M. Nematode.net update improvements enabling more efficient data mining and comparative nematode genomics. Nucleic Acids Res. 2009 Jan;37(Database issue):D571-8. doi: 10.1093/nar/gkn744. Epub 2008 Oct 21. PubMed PMID: 18940860; PubMed Central PMCID: PMC2686480.

Wang Z, Martin J, Abubucker S, Yin Y, Gasser RB, Mitreva M. Systematic analysis of insertions and deletions specific to nematode proteins and their proposed functional and evolutionary relevance. BMC Evol Biol. 2009 Jan 28;9:23. doi: 10.1186/1471-2148-9-23. PubMed PMID: 19175938; PubMed Central PMCID: PMC2644674.

Bennett WE Jr, Tarr PI. Enteric infections and diagnostic testing. Curr Opin Gastroenterol. 2009 Jan;25(1):1-7. doi: 10.1097/MOG.0b013e32831ba094. Review. PubMed PMID: 19114768.

Weil GJ, Kastens W, Susapu M, Laney SJ, Williams SA, King CL, Kazura JW, Bockarie MJ. The impact of repeated rounds of mass drug administration with diethylcarbamazine plus albendazole on bancroftian filariasis in Papua New Guinea. PLoS Negl Trop Dis. 2008;2(12):e344. doi: 10.1371/journal.pntd.0000344. Epub 2008 Dec 9. PubMed PMID: 19065257; PubMed Central PMCID: PMC2586652.

Watson ME Jr, Storch GA. Recurrent Mycoplasma pneumoniae infection in a human immunodeficiency virus-positive child. Pediatr Infect Dis J. 2008 Nov;27(11):1037-8. PubMed PMID: 18985833.

Wylie T, Martin J, Abubucker S, Yin Y, Messina D, Wang Z, McCarter JP, Mitreva M. NemaPath: online exploration of KEGG-based metabolic pathways for nematodes. BMC Genomics. 2008 Nov 4;9:525. doi: 10.1186/1471-2164-9-525. PubMed PMID: 18983679; PubMed Central PMCID: PMC2588608.

Tarr PI. The late 1970s: a lull in the action on kuru. Philos Trans R Soc Lond B Biol Sci. 2008 Nov 27;363(1510):3668-70. doi: 10.1098/rstb.2008.4033. PubMed PMID: 18849276; PubMed Central PMCID: PMC2735550.

Bohl DL, Brennan DC, Ryschkewitsch C, Gaudreault-Keener M, Major EO, Storch GA. BK virus antibody titers and intensity of infections after renal transplantation. J Clin Virol. 2008 Oct;43(2):184-9. doi: 10.1016/j.jcv.2008.06.009. Epub 2008 Aug 3. PubMed PMID: 18676176; PubMed Central PMCID: PMC2701220.

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Yin Y, Martin J, Abubucker S, Scott AL, McCarter JP, Wilson RK, Jasmer DP, Mitreva M. Intestinal transcriptomes of nematodes: comparison of the parasites Ascaris suum and Haemonchus contortus with the free-living Caenorhabditis elegans. PLoS Negl Trop Dis. 2008 Aug 6;2(8):e269. doi: 10.1371/journal.pntd.0000269. PubMed PMID: 18682827; PubMed Central PMCID: PMC2483350.

Mitreva M, Jasmer DP. Advances in the sequencing of the genome of the adenophorean nematode Trichinella spiralis. Parasitology. 2008 Jul;135(8):869-80. doi: 10.1017/S0031182008004472. Review. PubMed PMID: 18598573; PubMed Central PMCID: PMC3718030.

Fritz SA, Garbutt J, Elward A, Shannon W, Storch GA. Prevalence of and risk factors for community-acquired methicillin-resistant and methicillin-sensitive staphylococcus aureus colonization in children seen in a practice-based research network. Pediatrics. 2008 Jun;121(6):1090-8. doi: 10.1542/peds.2007-2104. PubMed PMID: 18519477.

McNulty SN, Weil GJ, Heinz M, Crosby SD, Fischer PU. Brugia malayi: whole genome amplification for genomic characterization of filarial parasites. Exp Parasitol. 2008 Jun;119(2):256-63. doi: 10.1016/j.exppara.2008.02.003. Epub 2008 Feb 19. PubMed PMID: 18359019.

Dubberke ER, Weil GJ. A woman from Honduras with a painful forearm and fever. Am J Trop Med Hyg. 2008 May;78(5):697-8. PubMed PMID: 18458298.

Jiang D, Li BW, Fischer PU, Weil GJ. Localization of gender-regulated gene expression in the filarial nematode Brugia malayi. Int J Parasitol. 2008 Apr;38(5):503-12. Epub 2007 Oct 9. PubMed PMID: 18001741.

Finkbeiner SR, Allred AF, Tarr PI, Klein EJ, Kirkwood CD, Wang D. Metagenomic analysis of human diarrhea: viral detection and discovery. PLoS Pathog. 2008 Feb 29;4(2):e1000011. doi: 10.1371/journal.ppat.1000011. PubMed PMID: 18398449; PubMed Central PMCID: PMC2290972.

Abubucker S, Martin J, Yin Y, Fulton L, Yang SP, Hallsworth-Pepin K, Johnston JS, Hawdon J, McCarter JP, Wilson RK, Mitreva M. The canine hookworm genome: analysis and classification of Ancylostoma caninum survey sequences. Mol Biochem Parasitol. 2008 Feb;157(2):187-92. Epub 2007 Nov 9. PubMed PMID: 18082904; PubMed Central PMCID: PMC2265417.

Le BM, Demertzis LM, Wu G, Tibbets RJ, Buller R, Arens MQ, Gaynor AM, Storch GA, Wang D. Clinical and epidemiologic characterization of WU polyomavirus infection, St. Louis, Missouri. Emerg Infect Dis. 2007 Dec;13(12):1936-8. doi: 10.3201/eid1312.070977. PubMed PMID: 18258052; PubMed Central PMCID: PMC2876771.

Jones JC, Rogers TJ, Brookmeyer P, Dunne WM Jr, Storch GA, Coopersmith CM, Fraser VJ, Warren DK. Mupirocin resistance in patients colonized with methicillin-resistant Staphylococcus aureus in a surgical intensive care unit. Clin Infect Dis. 2007 Sep 1;45(5):541-7. Epub 2007 Jul 13. PubMed PMID: 17682986.

Mitreva M, Zarlenga DS, McCarter JP, Jasmer DP. Parasitic nematodes – from genomes to control. Vet Parasitol. 2007 Aug 19;148(1):31-42. Epub 2007 Jun 7. Review. PubMed PMID: 17560034.

Shaikh N, Holt NJ, Johnson JR, Tarr PI. Fim operon variation in the emergence of Enterohemorrhagic Escherichia coli: an evolutionary and functional analysis. FEMS Microbiol Lett. 2007 Aug;273(1):58-63. Epub 2007 Jun 6. PubMed PMID: 17559392.

Elizur A, Orscheln RC, Ferkol TW, Atkinson JJ, Dunne WM Jr, Buller RS, Armstrong JR, Mardis ER, Storch GA, Cannon CL. Panton-Valentine Leukocidin-positive methicillin-resistant Staphylococcus aureus lung infection in patients with cystic fibrosis. Chest. 2007 Jun;131(6):1718-25. Epub 2007 Mar 30. PubMed PMID: 17400676.

Spivey JF, Singleton D, Sweet S, Storch GA, Hayashi RJ, Huddleston CB, Danziger-Isakov LA. Safety and efficacy of prolonged cytomegalovirus prophylaxis with intravenous ganciclovir in pediatric and young adult lung transplant recipients. Pediatr Transplant. 2007 May;11(3):312-8. PubMed PMID: 17430489; PubMed Central PMCID: PMC1930168.

Gaynor AM, Nissen MD, Whiley DM, Mackay IM, Lambert SB, Wu G, Brennan DC, Storch GA, Sloots TP, Wang D. Identification of a novel polyomavirus from patients with acute respiratory tract infections. PLoS Pathog. 2007 May 4;3(5):e64. PubMed PMID: 17480120; PubMed Central PMCID: PMC1864993.

Fischer P, Erickson SM, Fischer K, Fuchs JF, Rao RU, Christensen BM, Weil GJ. Persistence of Brugia malayi DNA in vector and non-vector mosquitoes: implications for xenomonitoring and transmission monitoring of lymphatic filariasis. Am J Trop Med Hyg. 2007 Mar;76(3):502-7. PubMed PMID: 17360875; PubMed Central PMCID: PMC2196403.

Uhlmann EJ, Seed PC, Schwan TG, Storch GA. Tick-borne relapsing fever polymerase chain reaction of tick-borne relapsing fever caused by Borrelia hermsii. Pediatr Infect Dis J. 2007 Mar;26(3):267-9. PubMed PMID: 17484230.

Weil GJ, Ramzy RM. Diagnostic tools for filariasis elimination programs. Trends Parasitol. 2007 Feb;23(2):78-82. Epub 2006 Dec 14. Review. PubMed PMID: 17174604.

Rao RU, Weil GJ, Fischer K, Supali T, Fischer P. Detection of Brugia parasite DNA in human blood by real-time PCR. J Clin Microbiol. 2006 Nov;44(11):3887-93. Epub 2006 Sep 6. PubMed PMID: 16957038; PubMed Central PMCID: PMC1698366.

Mitreva M, Jasmer DP. Biology and genome of Trichinella spiralis. WormBook. 2006 Nov 23:1-21. Review. PubMed PMID: 18050431; PubMed Central PMCID: PMC4781409.

Li BW, Rush AC, Weil GJ, McCarter JP, Mitreva M. Brugia malayi: effects of radiation and culture on gene expression in infective larvae. Mol Biochem Parasitol. 2006 Oct;149(2):201-7. Epub 2006 Jun 22. PubMed PMID: 16824625.

Khoury JA, Storch GA, Bohl DL, Schuessler RM, Torrence SM, Lockwood M, Gaudreault-Keener M, Koch MJ, Miller BW, Hardinger KL, Schnitzler MA, Brennan DC. Prophylactic versus preemptive oral valganciclovir for the management of cytomegalovirus infection in adult renal transplant recipients. Am J Transplant. 2006 Sep;6(9):2134-43. Epub 2006 Jun 19. PubMed PMID: 16780548.

Yin Y, Martin J, McCarter JP, Clifton SW, Wilson RK, Mitreva M. Identification and analysis of genes expressed in the adult filarial parasitic nematode Dirofilaria immitis. Int J Parasitol. 2006 Jun;36(7):829-39. Epub 2006 Mar 31. PubMed PMID: 16697384.

Dubberke ER, Tu B, Rivet DJ, Storch GA, Apisarnthanarak A, Schmidt RE, Weiss S, Polish LB. Acute meningoencephalitis caused by adenovirus serotype 26. J Neurovirol. 2006 Jun;12(3):235-40. PubMed PMID: 16877305.

Garbutt J, Rosenbloom I, Wu J, Storch GA. Empiric first-line antibiotic treatment of acute otitis in the era of the heptavalent pneumococcal conjugate vaccine. Pediatrics. 2006 Jun;117(6):e1087-94. PubMed PMID: 16740811.

Liao RS, Storch GA, Buller RS, Orscheln RC, Mardis ER, Armstrong JR, Dunne WM Jr. Blinded comparison of repetitive-sequence PCR and multilocus sequence typing for genotyping methicillin-resistant Staphylococcus aureus isolates from a children’s hospital in St. Louis, Missouri. J Clin Microbiol. 2006 Jun;44(6):2254-7. PubMed PMID: 16757633; PubMed Central PMCID: PMC1489435.

Rao RU, Atkinson LJ, Ramzy RM, Helmy H, Farid HA, Bockarie MJ, Susapu M, Laney SJ, Williams SA, Weil GJ. A real-time PCR-based assay for detection of Wuchereria bancrofti DNA in blood and mosquitoes. Am J Trop Med Hyg. 2006 May;74(5):826-32. PubMed PMID: 16687688; PubMed Central PMCID: PMC2196401.

Agapov E, Sumino KC, Gaudreault-Keener M, Storch GA, Holtzman MJ. Genetic variability of human metapneumovirus infection: evidence of a shift in viral genotype without a change in illness. J Infect Dis. 2006 Feb 1;193(3):396-403. Epub 2005 Dec 28. PubMed PMID: 16388487.

Verkruyse LA, Storch GA, Devine SM, Dipersio JF, Vij R. Once daily ganciclovir as initial pre-emptive therapy delayed until threshold CMV load > or =10000 copies/ml: a safe and effective strategy for allogeneic stem cell transplant patients. Bone Marrow Transplant. 2006 Jan;37(1):51-6. PubMed PMID: 16284613.

Khan A, Su C, German M, Storch GA, Clifford DB, Sibley LD. Genotyping of Toxoplasma gondii strains from immunocompromised patients reveals high prevalence of type I strains. J Clin Microbiol. 2005 Dec;43(12):5881-7. PubMed PMID: 16333071; PubMed Central PMCID: PMC1317192.

Mitreva M, Blaxter ML, Bird DM, McCarter JP. Comparative genomics of nematodes. Trends Genet. 2005 Oct;21(10):573-81. PubMed PMID: 16099532.

Rao R, Moussa H, Vanderwaal RP, Sampson E, Atkinson LJ, Weil GJ. Effects of gamma radiation on Brugia malayi infective larvae and their intracellular Wolbachia bacteria. Parasitol Res. 2005 Oct;97(3):219-27. Epub 2005 Jul 5. PubMed PMID: 15997407.

Sumino KC, Agapov E, Pierce RA, Trulock EP, Pfeifer JD, Ritter JH, Gaudreault-Keener M, Storch GA, Holtzman MJ. Detection of severe human metapneumovirus infection by real-time polymerase chain reaction and histopathological assessment. J Infect Dis. 2005 Sep 15;192(6):1052-60. Epub 2005 Aug 4. PubMed PMID: 16107959.

Li BW, Rush AC, Crosby SD, Warren WC, Williams SA, Mitreva M, Weil GJ. Profiling of gender-regulated gene transcripts in the filarial nematode Brugia malayi by cDNA oligonucleotide array analysis. Mol Biochem Parasitol. 2005 Sep;143(1):49-57. PubMed PMID: 15992941.

Mitreva M, Appleton J, McCarter JP, Jasmer DP. Expressed sequence tags from life cycle stages of Trichinella spiralis: application to biology and parasite control. Vet Parasitol. 2005 Sep 5;132(1-2):13-7. Review. PubMed PMID: 15993542.

Bohl DL, Storch GA, Ryschkewitsch C, Gaudreault-Keener M, Schnitzler MA, Major EO, Brennan DC. Donor origin of BK virus in renal transplantation and role of HLA C7 in susceptibility to sustained BK viremia. Am J Transplant. 2005 Sep;5(9):2213-21. PubMed PMID: 16095500.

Snyder MD, Storch GA, Clifford DB. Atypical PML leading to a diagnosis of common variable immunodeficiency. Neurology. 2005 May 10;64(9):1661. PubMed PMID: 15883345.

Brennan DC, Agha I, Bohl DL, Schnitzler MA, Hardinger KL, Lockwood M, Torrence S, Schuessler R, Roby T, Gaudreault-Keener M, Storch GA. Incidence of BK with tacrolimus versus cyclosporine and impact of preemptive immunosuppression reduction. Am J Transplant. 2005 Mar;5(3):582-94. Erratum in: Am J Transplant. 2005 Apr;5(4 Pt 1):839. PubMed PMID: 15707414.

Orscheln RC, Johnson DR, Olson SM, Presti RM, Martin JM, Kaplan EL, Storch GA. Intrinsic reduced susceptibility of serotype 6 Streptococcus pyogenes to fluoroquinolone antibiotics. J Infect Dis. 2005 Apr 15;191(8):1272-9. Epub 2005 Mar 7. PubMed PMID: 15776373.

Mitreva M, McCarter JP, Arasu P, Hawdon J, Martin J, Dante M, Wylie T, Xu J, Stajich JE, Kapulkin W, Clifton SW, Waterston RH, Wilson RK. Investigating hookworm genomes by comparative analysis of two Ancylostoma species. BMC Genomics. 2005 Apr 26;6:58. PubMed PMID: 15854223; PubMed Central PMCID: PMC1112591.

Tarr PI, Gordon CA, Chandler WL. Shiga-toxin-producing Escherichia coli and haemolytic uraemic syndrome. Lancet. 2005 Mar 19-25;365(9464):1073-86. Review. PubMed PMID: 15781103.

Johnson JR, Jelacic S, Schoening LM, Clabots C, Shaikh N, Mobley HL, Tarr PI. The IrgA homologue adhesin Iha is an Escherichia coli virulence factor in murine urinary tract infection. Infect Immun. 2005 Feb;73(2):965-71. PubMed PMID: 15664939; PubMed Central PMCID: PMC546986.

Rao RU, Atkinson LJ, Vanderwall RP, Weil GJ. Brugia malayi: effects of gamma radiation on adult worms and their intracellular Wolbachia bacteria. Exp Parasitol. 2005 Feb;109(2):87-93. Epub 2005 Jan 7. PubMed PMID: 15687015.

Bradley JP, Bacharier LB, Bonfiglio J, Schechtman KB, Strunk R, Storch G, Castro M. Severity of respiratory syncytial virus bronchiolitis is affected by cigarette smoke exposure and atopy. Pediatrics. 2005 Jan;115(1):e7-14. PubMed PMID: 15629968.

Uhlmann EJ, Tebas P, Storch GA, Powderly WG, Lie YS, Whitcomb JM, Hellmann NS, Arens MQ. Effects of the G190A substitution of HIV reverse transcriptase on phenotypic susceptibility of patient isolates to delavirdine. J Clin Virol. 2004 Nov;31(3):198-203. PubMed PMID: 15465412.

Li BW, Rush AC, Tan J, Weil GJ. Quantitative analysis of gender-regulated transcripts in the filarial nematode Brugia malayi by real-time RT-PCR. Mol Biochem Parasitol. 2004 Oct;137(2):329-37. PubMed PMID: 15383303.

Mitreva M, Jasmer DP, Appleton J, Martin J, Dante M, Wylie T, Clifton SW, Waterston RH, McCarter JP. Gene discovery in the adenophorean nematode Trichinella spiralis: an analysis of transcription from three life cycle stages. Mol Biochem Parasitol. 2004 Oct;137(2):277-91. PubMed PMID: 15383298.

Mitreva M, Elling AA, Dante M, Kloek AP, Kalyanaraman A, Aluru S, Clifton SW, Bird DM, Baum TJ, McCarter JP. A survey of SL1-spliced transcripts from the root-lesion nematode Pratylenchus penetrans. Mol Genet Genomics. 2004 Sep;272(2):138-48. Epub 2004 Aug 28. PubMed PMID: 15338281.

Garbutt J, St Geme JW 3rd, May A, Storch GA, Shackelford PG. Developing community-specific recommendations for first-line treatment of acute otitis media: is high-dose amoxicillin necessary? Pediatrics. 2004 Aug;114(2):342-7. PubMed PMID: 15286214.

Buller RS, Storch G. Evaluation of a real-time PCR assay using the LightCycler system for detection of parvovirus B19 DNA. J Clin Microbiol. 2004 Jul;42(7):3326-8. PubMed PMID: 15243107; PubMed Central PMCID: PMC446240.

DeShields A, Borman-Shoap E, Peters JE, Gaudreault-Keener M, Arens MQ, Storch GA. Detection of pathogenic Ehrlichia in ticks collected at acquisition sites of human ehrlichiosis in Missouri. Mo Med. 2004 Mar-Apr;101(2):132-6. PubMed PMID: 15119113.

Mitreva M, McCarter JP, Martin J, Dante M, Wylie T, Chiapelli B, Pape D, Clifton SW, Nutman TB, Waterston RH. Comparative genomics of gene expression in the parasitic and free-living nematodes Strongyloides stercoralis and Caenorhabditis elegans. Genome Res. 2004 Feb;14(2):209-20. PubMed PMID: 14762059; PubMed Central PMCID: PMC327096.

Li BW, Rush A, Zhang SR, Curtis KC, Weil GJ. Antibody responses to Brugia malayi antigens induced by DNA vaccination. Filaria J. 2004 Jan 22;3(1):1. PubMed PMID: 14738569; PubMed Central PMCID: PMC343290.

Wylie T, Martin JC, Dante M, Mitreva MD, Clifton SW, Chinwalla A, Waterston RH, Wilson RK, McCarter JP. Nematode.net: a tool for navigating sequences from parasitic and free-living nematodes. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D423-6. PubMed PMID: 14681448; PubMed Central PMCID: PMC308745.

Liddell AM, Stockham SL, Scott MA, Sumner JW, Paddock CD, Gaudreault-Keener M, Arens MQ, Storch GA. Predominance of Ehrlichia ewingii in Missouri dogs. J Clin Microbiol. 2003 Oct;41(10):4617-22. PubMed PMID: 14532192; PubMed Central PMCID: PMC254352.

Hardinger KL, Miller B, Storch GA, Desai NM, Brennan DC. West Nile virus-associated meningoencephalitis in two chronically immunosuppressed renal transplant recipients. Am J Transplant. 2003 Oct;3(10):1312-5. PubMed PMID: 14510707.

Kruger RM, Paranjothi S, Storch GA, Lynch JP, Trulock EP. Impact of prophylaxis with cytogam alone on the incidence of CMV viremia in CMV-seropositive lung transplant recipients. J Heart Lung Transplant. 2003 Jul;22(7):754-63. PubMed PMID: 12873543.

Arens MQ, Liddell AM, Buening G, Gaudreault-Keener M, Sumner JW, Comer JA, Buller RS, Storch GA. Detection of Ehrlichia spp. in the blood of wild white-tailed deer in Missouri by PCR assay and serologic analysis. J Clin Microbiol. 2003 Mar;41(3):1263-5. PubMed PMID: 12624063; PubMed Central PMCID: PMC150261.

McCarter JP, Mitreva MD, Martin J, Dante M, Wylie T, Rao U, Pape D, Bowers Y, Theising B, Murphy CV, Kloek AP, Chiapelli BJ, Clifton SW, Bird DM, Waterston RH. Analysis and functional classification of transcripts from the nematode Meloidogyne incognita. Genome Biol. 2003;4(4):R26. Epub 2003 Mar 31. PubMed PMID: 12702207; PubMed Central PMCID: PMC154577.

Liapis H, Storch GA, Hill DA, Rueda J, Brennan DC. CMV infection of the renal allograft is much more common than the pathology indicates: a retrospective analysis of qualitative and quantitative buffy coat CMV-PCR, renal biopsy pathology and tissue CMV-PCR. Nephrol Dial Transplant. 2003 Feb;18(2):397-402. PubMed PMID: 12543898.

Storch GA. Rapid diagnostic tests for influenza. Curr Opin Pediatr. 2003 Feb;15(1):77-84. Review. PubMed PMID: 12544276.

Lewis JS Jr, Khoury H, Storch GA, DiPersio J. PCR for the diagnosis of toxoplasmosis after hematopoietic stem cell transplantation. Expert Rev Mol Diagn. 2002 Nov;2(6):616-24. Review. PubMed PMID: 12465457.

Michalski ML, Monsey JD, Cistola DP, Weil GJ. An embryo-associated fatty acid-binding protein in the filarial nematode Brugia malayi. Mol Biochem Parasitol. 2002 Sep-Oct;124(1-2):1-10. PubMed PMID: 12387845.

Sanchez JL, Storch GA. Multiplex, quantitative, real-time PCR assay for cytomegalovirus and human DNA. J Clin Microbiol. 2002 Jul;40(7):2381-6. PubMed PMID: 12089251; PubMed Central PMCID: PMC120584.

Liddell AM, Sumner JW, Paddock CD, Rikihisa Y, Unver A, Buller RS, Storch GA. Reinfection with Ehrlichia chaffeensis in a liver transplant recipient. Clin Infect Dis. 2002 Jun 15;34(12):1644-7. Epub 2002 May 16. PubMed PMID: 12032902.

Rao RU, Moussa H, Weil GJ. Brugia malayi: effects of antibacterial agents on larval viability and development in vitro. Exp Parasitol. 2002 May;101(1):77-81. PubMed PMID: 12243742.

Danziger-Isakov LA, Storch GA. Prevention and treatment of cytomegalovirus infections in solid organ transplant recipients. Pediatr Infect Dis J. 2002 May;21(5):432-4. Review. PubMed PMID: 12150182.

McConkey SJ, Youssef FG, Azem E, Frenck RW, Weil GJ. Evaluation of a rapid-format antibody test and the tuberculin skin test for diagnosis of tuberculosis in two contrasting endemic settings. Int J Tuberc Lung Dis. 2002 Mar;6(3):246-52. PubMed PMID: 11934143.

Storch GA. New developments in tick-borne infections. Pediatr Ann. 2002 Mar;31(3):200-4. Review. PubMed PMID: 11905294.

Sanchez JL, Kruger RM, Paranjothi S, Trulock EP, Lynch JP, Hicks C, Shannon WD, Storch GA. Relationship of cytomegalovirus viral load in blood to pneumonitis in lung transplant recipients. Transplantation. 2001 Aug 27;72(4):733-5. PubMed PMID: 11544440.

Reploeg MD, Storch GA, Clifford DB. Bk virus: a clinical review. Clin Infect Dis. 2001 Jul 15;33(2):191-202. Epub 2001 Jun 20. Review. PubMed PMID: 11418879.

Johnson RM, Little JR, Storch GA. Kawasaki-like syndromes associated with human immunodeficiency virus infection. Clin Infect Dis. 2001 Jun 1;32(11):1628-34. Epub 2001 May 4. Review. PubMed PMID: 11340536.

Young PP, Buller RS, Storch GA. Evaluation of a commercial DNA enzyme immunoassay for detection of enterovirus reverse transcription-PCR products amplified from cerebrospinal fluid specimens. J Clin Microbiol. 2000 Nov;38(11):4260-1. PubMed PMID: 11060104; PubMed Central PMCID: PMC87577.

Storch GA. Diagnostic virology. Clin Infect Dis. 2000 Sep;31(3):739-51. Epub 2000 Oct 4. Review. PubMed PMID: 11017824.

Wong M, Schlaggar BL, Buller RS, Storch GA, Landt M. Cerebrospinal fluid protein concentration in pediatric patients: defining clinically relevant reference values. Arch Pediatr Adolesc Med. 2000 Aug;154(8):827-31. PubMed PMID: 10922281.

Zhang S, Li BW, Weil GJ. Paper chromatography hybridization: a rapid method for detection of Onchocerca volvulus DNA amplified by PCR. Am J Trop Med Hyg. 2000 Jul-Aug;63(1-2):85-9. PubMed PMID: 11358002.

Leonard JR, Moran CJ, Cross DT 3rd, Wippold FJ 2nd, Schlesinger Y, Storch GA. MR imaging of herpes simplex type 1 encephalitis in infants and young children: a separate pattern of findings. AJR Am J Roentgenol. 2000 Jun;174(6):1651-5. PubMed PMID: 10845501.

Brennan DC, Storch GA, Singer GG, Lee L, Rueda J, Schnitzler MA. The prevalence of human herpesvirus-7 in renal transplant recipients is unaffected by oral or intravenous ganciclovir. J Infect Dis. 2000 May;181(5):1557-61. Epub 2000 May 8. PubMed PMID: 10823753.

Vincent JA, Lustigman S, Zhang S, Weil GJ. A comparison of newer tests for the diagnosis of onchocerciasis. Ann Trop Med Parasitol. 2000 Apr;94(3):253-8. PubMed PMID: 10884870.

Kruger RM, Shannon WD, Arens MQ, Lynch JP, Storch GA, Trulock EP. The impact of ganciclovir-resistant cytomegalovirus infection after lung transplantation. Transplantation. 1999 Nov 15;68(9):1272-9. PubMed PMID: 10573063.

Michalski ML, Weil GJ. Gender-specific gene expression in Brugia malayi. Mol Biochem Parasitol. 1999 Nov 30;104(2):247-57. PubMed PMID: 10593179.

Li BW, Zhang S, Curtis KC, Weil GJ. Immune responses to Brugia malayi paramyosin in rodents after DNA vaccination. Vaccine. 1999 Aug 20;18(1-2):76-81. PubMed PMID: 10501237.

Weil GJ, Ramzy RM, El Setouhy M, Kandil AM, Ahmed ES, Faris R. A longitudinal study of Bancroftian filariasis in the Nile Delta of Egypt: baseline data and one-year follow-up. Am J Trop Med Hyg. 1999 Jul;61(1):53-8. PubMed PMID: 10432056.

Buller RS, Arens M, Hmiel SP, Paddock CD, Sumner JW, Rikhisa Y, Unver A, Gaudreault-Keener M, Manian FA, Liddell AM, Schmulewitz N, Storch GA. Ehrlichia ewingii, a newly recognized agent of human ehrlichiosis. N Engl J Med. 1999 Jul 15;341(3):148-55. PubMed PMID: 10403852.

Pomeranz HD, Storch GA, Lueder GT. Pediatric meningococcal conjunctivitis. J Pediatr Ophthalmol Strabismus. 1999 May-Jun;36(3):161-3. PubMed PMID: 10358823.

Zhang S, Li B, Weil GJ. Human antibody responses to Brugia malayi antigens in brugian filariasis. Int J Parasitol. 1999 Mar;29(3):429-36. PubMed PMID: 10333326.

Khoury H, Adkins D, Brown R, Goodnough L, Gokden M, Roberts T, Storch G, DiPersio J. Successful treatment of cerebral toxoplasmosis in a marrow transplant recipient: contribution of a PCR test in diagnosis and early detection. Bone Marrow Transplant. 1999 Feb;23(4):409-11. PubMed PMID: 10100588.

Tebas P, Nease RF, Storch GA. Use of the polymerase chain reaction in the diagnosis of herpes simplex encephalitis: a decision analysis model. Am J Med. 1998 Oct;105(4):287-95. PubMed PMID: 9809689.

Roberts TC, Brennan DC, Buller RS, Gaudreault-Keener M, Schnitzler MA, Sternhell KE, Garlock KA, Singer GG, Storch GA. Quantitative polymerase chain reaction to predict occurrence of symptomatic cytomegalovirus infection and assess response to ganciclovir therapy in renal transplant recipients. J Infect Dis. 1998 Sep;178(3):626-35. PubMed PMID: 9728529.

Storch GA. Humanized monoclonal antibody for prevention of respiratory syncytial virus infection. Pediatrics. 1998 Sep;102(3 Pt 1):648-51. PubMed PMID: 9738192.

Chandrashekar R, Curtis KC, Lu W, Weil GJ. Molecular cloning of an enzymatically active thioredoxin peroxidase from Onchocerca volvulus. Mol Biochem Parasitol. 1998 Jun 1;93(2):309-12. PubMed PMID: 9662714.

Brennan DC, Garlock KA, Singer GG, Schnitzler MA, Lippmann BJ, Buller RS, Gaudreault-Keener M, Lowell JA, Shenoy S, Howard TK, Storch GA. Prophylactic oral ganciclovir compared with deferred therapy for control of cytomegalovirus in renal transplant recipients. Transplantation. 1997 Dec 27;64(12):1843-6. PubMed PMID: 9422429.

Weil GJ, Lammie PJ, Weiss N. The ICT Filariasis Test: A rapid-format antigen test for diagnosis of bancroftian filariasis. Parasitol Today. 1997 Oct;13(10):401-4. PubMed PMID: 15275155.

Roberts TC, Buller RS, Gaudreault-Keener M, Sternhell KE, Garlock K, Singer GG, Brennan DC, Storch GA. Effects of storage temperature and time on qualitative and quantitative detection of cytomegalovirus in blood specimens by shell vial culture and PCR. J Clin Microbiol. 1997 Sep;35(9):2224-8. PubMed PMID: 9276392; PubMed Central PMCID: PMC229944.

Kaltwasser G, Diego J, Welby-Sellenriek PL, Ferrett R, Caparon M, Storch GA. Polymerase chain reaction for Streptococcus pyogenes used to evaluate an optical immunoassay for the detection of group A streptococci in children with pharyngitis. Pediatr Infect Dis J. 1997 Aug;16(8):748-53. PubMed PMID: 9271035.

Welby-Sellenriek PL, Keller DS, Ferrett RJ, Storch GA. Comparison of the BacT/Alert FAN aerobic and the Difco ESP 80A aerobic bottles for pediatric blood cultures. J Clin Microbiol. 1997 May;35(5):1166-71. PubMed PMID: 9114401; PubMed Central PMCID: PMC232723.

Chuck RS, Olk RJ, Weil GJ, Akduman L, Benenson IL, Smith ME, Kaplan HJ. Surgical removal of a subretinal proliferating cysticercus of taeniaeformis crassiceps. Arch Ophthalmol. 1997 Apr;115(4):562-3. PubMed PMID: 9109776.

Brennan DC, Garlock KA, Lippmann BJ, Buller RS, Gaudreault-Keener M, Lowell JA, Miller SB, Shenoy S, Howard TK, Storch GA. Polymerase chain reaction-triggered preemptive or deferred therapy to control cytomegalovirus-associated morbidity and costs in renal transplant patients. Transplant Proc. 1997 Feb-Mar;29(1-2):809-11. PubMed PMID: 9123536.

Roberts TC, Storch GA. Multiplex PCR for diagnosis of AIDS-related central nervous system lymphoma and toxoplasmosis. J Clin Microbiol. 1997 Jan;35(1):268-9. PubMed PMID: 8968922; PubMed Central PMCID: PMC229553.

Brennan DC, Garlock KA, Lippmann BA, Buller RS, Gaudreault-Keener M, Lowell JA, Miller SB, Shenoy S, Howard TK, Storch GA. Control of cytomegalovirus-associated morbidity in renal transplant patients using intensive monitoring and either preemptive or deferred therapy. J Am Soc Nephrol. 1997 Jan;8(1):118-25. PubMed PMID: 9013456.

Clifford DB, Arribas JR, Storch GA, Tourtellote W, Wippold FJ. Magnetic resonance brain imaging lacks sensitivity for AIDS associated cytomegalovirus encephalitis. J Neurovirol. 1996 Dec;2(6):397-403. PubMed PMID: 8972421.

Chandrashekar R, Ogunrinade AF, Weil GJ. Use of recombinant Onchocerca volvulus antigens for diagnosis and surveillance of human onchocerciasis. Trop Med Int Health. 1996 Oct;1(5):575-80. PubMed PMID: 8911441.

Arribas JR, Storch GA, Clifford DB, Tselis AC. Cytomegalovirus encephalitis. Ann Intern Med. 1996 Oct 1;125(7):577-87. Review. PubMed PMID: 8815757.

Weil GJ, Ramzy RM, Chandrashekar R, Gad AM, Lowrie RC Jr, Faris R. Parasite antigenemia without microfilaremia in bancroftian filariasis. Am J Trop Med Hyg. 1996 Sep;55(3):333-7. PubMed PMID: 8842125.

Kenagy DN, Schlesinger Y, Weck K, Ritter JH, Gaudreault-Keener MM, Storch GA. Epstein-Barr virus DNA in peripheral blood leukocytes of patients with posttransplant lymphoproliferative disease. Transplantation. 1995 Sep 27;60(6):547-54. PubMed PMID: 7570949.

Arribas JR, Clifford DB, Fichtenbaum CJ, Commins DL, Powderly WG, Storch GA. Level of cytomegalovirus (CMV) DNA in cerebrospinal fluid of subjects with AIDS and CMV infection of the central nervous system. J Infect Dis. 1995 Aug;172(2):527-31. PubMed PMID: 7622897.

Chandrashekar R, Van Swinderen B, Taylor HR, Weil GJ. Effect of ivermectin prophylaxis on antibody responses to Onchocerca volvulus recombinant antigens in experimentally infected chimpanzees. Int J Parasitol. 1995 Aug;25(8):983-8. PubMed PMID: 8550298.

Chandrashekar R, Curtis KC, Li BW, Weil GJ. Molecular characterization of a Brugia malayi intermediate filament protein which is an excretory-secretory product of adult worms. Mol Biochem Parasitol. 1995 Jul;73(1-2):231-9. PubMed PMID: 8577331.

Chandrashekar R, Curtis KC, Weil GJ. Molecular characterization of a parasite antigen in sera from onchocerciasis patients that is immunologically cross-reactive with human keratin. J Infect Dis. 1995 Jun;171(6):1586-92. PubMed PMID: 7539474.

Arribas JR, Clifford DB, Fichtenbaum CJ, Roberts RL, Powderly WG, Storch GA. Detection of Epstein-Barr virus DNA in cerebrospinal fluid for diagnosis of AIDS-related central nervous system lymphoma. J Clin Microbiol. 1995 Jun;33(6):1580-3. PubMed PMID: 7650190; PubMed Central PMCID: PMC228219.

Welby PL, Keller DS, Storch GA. Comparison of automated Difco ESP blood culture system with biphasic BBL Septi-Chek system for detection of bloodstream infections in pediatric patients. J Clin Microbiol. 1995 May;33(5):1084-8. PubMed PMID: 7615710; PubMed Central PMCID: PMC228109.

Buller RS, Gaudreault-Keener M, Rossiter-Fornoff J, Storch GA. Direct quantitative comparison of shell vial and conventional culture for detection of CMV viremia. Clin Diagn Virol. 1995 May;3(4):317-22. PubMed PMID: 15566812.

Li BW, Hoppe PE, Weil GJ. Cloning of an early immunodominant filarial antigen: a member of the Brugia malayi myosin heavy chain gene family. Int J Parasitol. 1995 May;25(5):611-9. PubMed PMID: 7635639.

Bailey TC, Buller RS, Ettinger NA, Trulock EP, Gaudreault-Keener M, Langlois TM, Fornoff JE, Cooper JD, Storch GA. Quantitative analysis of cytomegalovirus viremia in lung transplant recipients. J Infect Dis. 1995 Apr;171(4):1006-10. PubMed PMID: 7706777.

Schlesinger Y, Tebas P, Gaudreault-Keener M, Buller RS, Storch GA. Herpes simplex virus type 2 meningitis in the absence of genital lesions: improved recognition with use of the polymerase chain reaction. Clin Infect Dis. 1995 Apr;20(4):842-8. PubMed PMID: 7795083.

Schlesinger Y, Buller RS, Brunstrom JE, Moran CJ, Storch GA. Expanded spectrum of herpes simplex encephalitis in childhood. J Pediatr. 1995 Feb;126(2):234-41. PubMed PMID: 7844669.

Storch GA, Gaudreault-Keener M, Welby PC. Comparison of heparin and EDTA transport tubes for detection of cytomegalovirus in leukocytes by shell vial assay, pp65 antigenemia assay, and PCR. J Clin Microbiol. 1994 Oct;32(10):2581-3. PubMed PMID: 7814504; PubMed Central PMCID: PMC264108.

Schlesinger Y, Sawyer MH, Storch GA. Enteroviral meningitis in infancy: potential role for polymerase chain reaction in patient management. Pediatrics. 1994 Aug;94(2 Pt 1):157-62. PubMed PMID: 8036066.

Lee SF, Buller R, Chansue E, Hanika WC, Brunt EM, Aquino T, Storch GA, Pepose JS. Vaccinia keratouveitis manifesting as a masquerade syndrome. Am J Ophthalmol. 1994 Apr 15;117(4):480-7. PubMed PMID: 8154530.

Welby PL, Keller DS, Cromien JL, Tebas P, Storch GA. Resistance to penicillin and non-beta-lactam antibiotics of Streptococcus pneumoniae at a children’s hospital. Pediatr Infect Dis J. 1994 Apr;13(4):281-7. PubMed PMID: 8036044.

Chandrashekar R, Curtis KC, Ramzy RM, Liftis F, Li BW, Weil GJ. Molecular cloning of Brugia malayi antigens for diagnosis of lymphatic filariasis. Mol Biochem Parasitol. 1994 Apr;64(2):261-71. PubMed PMID: 7935604.

Storch GA, Buller RS, Bailey TC, Ettinger NA, Langlois T, Gaudreault-Keener M, Welby PL. Comparison of PCR and pp65 antigenemia assay with quantitative shell vial culture for detection of cytomegalovirus in blood leukocytes from solid-organ transplant recipients. J Clin Microbiol. 1994 Apr;32(4):997-1003. PubMed PMID: 8027357; PubMed Central PMCID: PMC267169.

Schlesinger Y, Storch GA. Herpes simplex meningitis in infancy. Pediatr Infect Dis J. 1994 Feb;13(2):141-4. PubMed PMID: 8190540.

Storch GA, Ettinger NA, Ockner D, Wick MR, Gaudreault-Keener M, Rossiter J, Trulock EP, Cooper JD. Quantitative cultures of the cell fraction and supernatant of bronchoalveolar lavage fluid for the diagnosis of cytomegalovirus pneumonitis in lung transplant recipients. J Infect Dis. 1993 Dec;168(6):1502-6. PubMed PMID: 8245535.

Fichtenbaum CJ, Peterson LR, Weil GJ. Ehrlichiosis presenting as a life-threatening illness with features of the toxic shock syndrome. Am J Med. 1993 Oct;95(4):351-7. PubMed PMID: 8213865.

Stabell EC, O’Rourke SR, Storch GA, Olivo PD. Evaluation of a genetically engineered cell line and a histochemical beta-galactosidase assay to detect herpes simplex virus in clinical specimens. J Clin Microbiol. 1993 Oct;31(10):2796-8. PubMed PMID: 8253988; PubMed Central PMCID: PMC266019.

Chandrashekar R, Ogunrinade AF, Henry RW, Lustigman S, Weil GJ. Onchocerca volvulus: monoclonal antibodies to immune complex-associated parasite antigens. Exp Parasitol. 1993 Sep;77(2):224-34. PubMed PMID: 7690712.

Bailey TC, Ettinger NA, Storch GA, Trulock EP, Hanto DW, Dunagan WC, Jendrisak MD, McCullough CS, Kenzora JL, Powderly WG. Failure of high-dose oral acyclovir with or without immune globulin to prevent primary cytomegalovirus disease in recipients of solid organ transplants. Am J Med. 1993 Sep;95(3):273-8. PubMed PMID: 8396320.

Ettinger NA, Bailey TC, Trulock EP, Storch GA, Anderson D, Raab S, Spitznagel EL, Dresler C, Cooper JD. Cytomegalovirus infection and pneumonitis. Impact after isolated lung transplantation. Washington University Lung Transplant Group. Am Rev Respir Dis. 1993 Apr;147(4):1017-23. PubMed PMID: 8385429.

Storch GA, Hall CB, Anderson LJ, Park CS, Dohner DE. Antigenic and nucleic acid analysis of nosocomial isolates of respiratory syncytial virus. J Infect Dis. 1993 Mar;167(3):562-6. PubMed PMID: 8440927.

Li BW, Chandrashekar R, Weil GJ. Vaccination with recombinant filarial paramyosin induces partial immunity to Brugia malayi infection in jirds. J Immunol. 1993 Mar 1;150(5):1881-5. PubMed PMID: 8436822.

Bailey TC, Powderly WG, Storch GA, Miller SB, Dunkel JD, Woodward RS, Spitznagel E, Hanto DW, Dunagan WC. Symptomatic cytomegalovirus infection in renal transplant recipients given either Minnesota antilymphoblast globulin (MALG) or OKT3 for rejection prophylaxis. Am J Kidney Dis. 1993 Feb;21(2):196-201. PubMed PMID: 8381577.

McNearney T, Hornickova Z, Kloster B, Birdwell A, Storch GA, Polmar SH, Arens M, Ratner L. Evolution of sequence divergence among human immunodeficiency virus type 1 isolates derived from a blood donor and a recipient. Pediatr Res. 1993 Jan;33(1):36-42. PubMed PMID: 8433858.

Clifford DB, Buller RS, Mohammed S, Robison L, Storch GA. Use of polymerase chain reaction to demonstrate cytomegalovirus DNA in CSF of patients with human immunodeficiency virus infection. Neurology. 1993 Jan;43(1):75-9. PubMed PMID: 8380909.

Buller RS, Bailey TC, Ettinger NA, Keener M, Langlois T, Miller JP, Storch GA. Use of a modified shell vial technique to quantitate cytomegalovirus viremia in a population of solid-organ transplant recipients. J Clin Microbiol. 1992 Oct;30(10):2620-4. PubMed PMID: 1328280; PubMed Central PMCID: PMC270488.

Welby PL, Zusag TM, Storch GA. Comparison of the Bactec Peds Plus pediatric blood culture vial with Roche pediatric Septi-Chek for blood cultures from pediatric patients. J Clin Microbiol. 1992 May;30(5):1361-2. PubMed PMID: 1583151; PubMed Central PMCID: PMC265288.

Weil GJ, Li BW, Liftis F, Chandrashekar R. Brugia malayi: antibody responses to larval antigens in infected and immunized jirds. Exp Parasitol. 1992 May;74(3):315-23. PubMed PMID: 1582484.

Welby PL, Zusag TM, Orlando MF, Storch GA. Evaluation of the pediatric Septi-Chek blood culture system. Diagn Microbiol Infect Dis. 1992 May-Jun;15(4):301-6. PubMed PMID: 1611846.

Bailey TC, Trulock EP, Ettinger NA, Storch GA, Cooper JD, Powderly WG. Failure of prophylactic ganciclovir to prevent cytomegalovirus disease in recipients of lung transplants. J Infect Dis. 1992 Mar;165(3):548-52. PubMed PMID: 1311352.

Li BW, Chandrashekar R, Alvarez RM, Liftis F, Weil GJ. Identification of paramyosin as a potential protective antigen against Brugia malayi infection in jirds. Mol Biochem Parasitol. 1991 Dec;49(2):315-23. PubMed PMID: 1775173.

Weil GJ, Lammie PJ, Richards FO Jr, Eberhard ML. Changes in circulating parasite antigen levels after treatment of bancroftian filariasis with diethylcarbamazine and ivermectin. J Infect Dis. 1991 Oct;164(4):814-6. PubMed PMID: 1894943.

Chandrashekar R, Subrahmanyam D, Weil GJ. Effect of CGP 20376 on Brugia malayi and parasite antigenemia in jirds. J Parasitol. 1991 Jun;77(3):479-82. PubMed PMID: 2040959.

Storch GA, Anderson LJ, Park CS, Tsou C, Dohner DE. Antigenic and genomic diversity within group A respiratory syncytial virus. J Infect Dis. 1991 Apr;163(4):858-61. PubMed PMID: 2010638.

Arens M, Owen J, Hagerty CM, Reed CA, Storch GA. Optimizing recovery of cytomegalovirus in the shell vial culture procedure. Diagn Microbiol Infect Dis. 1991 Mar-Apr;14(2):125-30. PubMed PMID: 1651824.

Chandrashekar R, Ogunrinade AF, Alvarez RM, Kale OO, Weil GJ. Circulating immune complex-associated parasite antigens in human onchocerciasis. J Infect Dis. 1990 Nov;162(5):1159-64. PubMed PMID: 2230240.

Weil GJ. Parasite antigenemia in lymphatic filariasis. Exp Parasitol. 1990 Oct;71(3):353-6. Review. PubMed PMID: 2209794.

Marsano L, Perrillo RP, Flye MW, Hanto DW, Spitzer ED, Thomas JR, Murray PR, Windus DW, Brunt EM, Storch GA. Comparison of culture and serology for the diagnosis of cytomegalovirus infection in kidney and liver transplant recipients. J Infect Dis. 1990 Mar;161(3):454-61. PubMed PMID: 2155974.

Weil GJ, Ogunrinade AF, Chandrashekar R, Kale OO. IgG4 subclass antibody serology for onchocerciasis. J Infect Dis. 1990 Mar;161(3):549-54. PubMed PMID: 2179425.

Chandrashekar R, Yates JA, Weil GJ. Use of parasite antigen detection to monitor macrofilaricidal therapy in Brugia malayi-infected jirds. J Parasitol. 1990 Feb;76(1):122-4. PubMed PMID: 2405143.

Weil GJ, Chandrashekar R, Liftis F, McVay CS, Bosshardt SC, Klei TR. Circulating parasite antigen in Brugia pahangi-infected jirds. J Parasitol. 1990 Feb;76(1):78-84. PubMed PMID: 2405144.

Lee SF, Storch GA, Reed CA, Hagerty CM, Pepose JS. Comparative laboratory diagnosis of experimental herpes simplex keratitis. Am J Ophthalmol. 1990 Jan 15;109(1):8-12. PubMed PMID: 2153342.

Storch GA, Park CS, Dohner DE. RNA fingerprinting of respiratory syncytial virus using ribonuclease protection. Application to molecular epidemiology. J Clin Invest. 1989 Jun;83(6):1894-902. PubMed PMID: 2723064; PubMed Central PMCID: PMC303910.

Himmelreich CA, Orlando MF, Storch GA. Comparison of the Oxoid Signal blood culture system with supplemented peptone broth in a pediatric hospital. J Clin Microbiol. 1989 Jun;27(6):1262-5. PubMed PMID: 2787805; PubMed Central PMCID: PMC267538.

Alvarez RM, Henry RW, Weil GJ. Use of Iodogen and sulfosuccinimidobiotin to identify and isolate cuticular proteins of the filarial parasite Brugia malayi. Mol Biochem Parasitol. 1989 Mar 1;33(2):183-9. PubMed PMID: 2725583.

Weil GJ. Brugia malayi: detection of parasite antigen in sera from infected jirds. Exp Parasitol. 1988 Oct;67(1):54-62. PubMed PMID: 3049135.

Lenoir AA, Storch GA, DeSchryver-Kecskemeti K, Shackelford GD, Rothbaum RJ, Wear DJ, Rosenblum JL. Granulomatous hepatitis associated with cat scratch disease. Lancet. 1988 May 21;1(8595):1132-6. PubMed PMID: 2896959.

Weil GJ, Sethumadhavan KV, Santhanam S, Jain DC, Ghosh TK. Persistence of parasite antigenemia following diethylcarbamazine therapy of bancroftian filariasis. Am J Trop Med Hyg. 1988 May;38(3):589-95. PubMed PMID: 3079315.

Storch GA, Reed CA, Dalu ZA. Evaluation of a latex agglutination test for herpes simplex virus. J Clin Microbiol. 1988 Apr;26(4):787-8. PubMed PMID: 2835394; PubMed Central PMCID: PMC266451.

Cromien JL, Himmelreich CA, Glass RI, Storch GA. Evaluation of new commercial enzyme immunoassay for rotavirus detection. J Clin Microbiol. 1987 Dec;25(12):2359-62. PubMed PMID: 2828415; PubMed Central PMCID: PMC269488.

Weil GJ. Dirofilaria immitis: identification and partial characterization of parasite antigens in the serum of infected dogs. Exp Parasitol. 1987 Oct;64(2):244-51. PubMed PMID: 3308507.

Storch GA, Gruber C, Benz B, Beaudoin J, Hayes J. A rubella outbreak among dental students: description of the outbreak and analysis of control measures. Infect Control. 1985 Apr;6(4):150-6. PubMed PMID: 3845926.

Mitreva M, Wendl MC, Martin J, Wylie T, Yin Y, Larson A, Parkinson J, Waterston RH, McCarter JP. Codon usage patterns in Nematoda: analysis based on over 25 million codons in thirty-two species. Genome Biol. 2006;7(8):R75. PubMed PMID: 26271136; PubMed Central PMCID: PMC1779591.

Pickens DL, Schefft GL, Storch GA, Thach BT. Characterization of prolonged apneic episodes associated with respiratory syncytial virus infection. Pediatr Pulmonol. 1989;6(3):195-201. PubMed PMID: 2717245.

Grand MG, Storch GA. Presumed parvovirus B19-associated retinal pigment epitheliopathy. Retina. 2000;20(2):199-202. PubMed PMID: 10783955.

Mitreva M, Smant G, Helder J. Role of horizontal gene transfer in the evolution of plant parasitism among nematodes. Methods Mol Biol. 2009;532:517-35. doi: 10.1007/978-1-60327-853-9_30. Review. PubMed PMID: 19271205.

Zamora RL, del Priore LV, Storch GA, Gelb LD, Sharp J. Multiple recurrent branch retinal artery occlusions associated with varicella zoster virus. Retina. 1996;16(5):399-404. PubMed PMID: 8912966.

Mitreva M, Mardis ER. Large-scale sequencing and analytical processing of ESTs. Methods Mol Biol. 2009;533:153-87. doi: 10.1007/978-1-60327-136-3_8. PubMed PMID: 19277558.

Clifton SW, Mitreva M. Strategies for undertaking expressed sequence tag (EST) projects. Methods Mol Biol. 2009;533:13-32. doi: 10.1007/978-1-60327-136-3_2. Review. PubMed PMID: 19277564.

Ahn CK, Holt NJ, Tarr PI. Shiga-toxin producing Escherichia coli and the hemolytic uremic syndrome: what have we learned in the past 25 years? Adv Exp Med Biol. 2009;634:1-17. PubMed PMID: 19280844.