Publications

-Amacrine cells differentially balance zebrafish colour circuits in the central and peripheral retina
Wang X., Roberts P., Yoshimatsu T., Lagnado L., Baden T.
Cell Report (accepted)

– The developmental progression of eight opsin spectral signals recorded from the zebrafish retinal cone layer is altered by the timing and cell type expression of thyroxin receptor β2 (trβ2) gain-of-function transgenes
Nelson R., Balraj A., Suresh T., Elias L.J., Yoshimatsu T., Patterson S.S.
eNeuro (accepted)

– Divergent excitation two photon microscopy for 3D random access mesoscale imaging at single cell resolution.
Janiak F.K., Bartel P., Bale M., Yoshimatsu T., Komulainen R.H., Zhou M., Staras K., Prieto-Godino L.L., Euler T., Maravall M., Baden T.
Nature Communications (2022) 13:544

– Spectral inference reveals principal cone-integration rules of the zebrafish inner retina.
Bartel P., Yoshimatsu T., Janiak F.K., Baden T.
Current Biology (2021) S0960-9822(21)01287-2

– Notch-mediated re-specification of neuronal identity during central nervous system development
Engerer P., Petridou E., Williams P.R., Suzuki S.C., Yoshimatsu T., Portugues R., Misgeld T., Godinho L.
Current Biology (2021) S0960-9822(21)01185-4

– Eye-region specific ribbon tuning supports distinct modes of synaptic transmimssion in same-type cone-photoreceptors.
Schröder C., Oesterle J., Berens P.§, Yoshimatsu T. §, Baden T. §
eLife (2021) 10:e67851
(§: co-corresponding authors)

– Ancestral circuits for vertebrate colour vision emerge at the first retinal synapse.
Yoshimatsu T., Bartel P., Schröder C., Janiak F.K., St-Pierre F., Berens P., Baden T.
Science Advances (2021) 7(24):eabj6815

– A high-density narrow-field inhibitory retinal interneuron with direct coupling to Müller glia.
Grimes W.N., Göz Aytörk D., Hoon M., Yoshimatsu T., Gamlin C., Carrera D., Nath A., Nadal-Nicolas F.M., Ahlquist R.M., Sabnis A., Berson D.M., Diamond J.S., Wong R.O., Cepko C., Rieke F.
J. Neurosci. (2021) doi: https://doi.org/10.1523/JNEUROSCI.0199-20.2021

– Spherical arena reveals optokinetic response tuning to stimulus location, size and frequency across entire visual field of larval zebrafish.
Dehmelt F.A., Meier R., Hinz J., Yoshimatsu T., Simacek C.A., Huang R., Wang K., Baden T., Arrenberg A.B
eLife (2021) 10:e63355

– Fovea-like photoreceptor specialisations underlie single UV-cone driven prey capture behaviour in zebrafish.
Yoshimatsu T. §, Schröder C., Nevala N.E., Berens P., Baden T.§
Neuron (2020) 107(2):320-337
(§: co-corresponding authors)

– Conditional and biased regeneration of cone photoreceptor types in the zebrafish retina.
D’Orazi F.D., Suzuki S.C., Darling N., Wong R.O. §, Yoshimatsu T. §
Journal of Comparative Neurology (2020) 528:2816-2830
(§: co-corresponding authors)

– Zebrafish retinal ganglion cells asymmetrically encode spectral and temporal information across visual space.
Zhou M. *, Dear J. *, Roberts P.A., Janiak F.K., Semmelhack J., Yoshimatsu T., Baden T.
Current Biology (2020) 30(5):2927-2942

– Thyroid hormone receptor beta mutations alter photoreceptor development and function in Danio rerio (zebrafish).
Deveau C., Jiao X., Suzuki S.C., Krishnakumar A., Yoshimatsu T., Hejtmancik J.F., Nelson R.F.
PLoS Genetics (2020) 16(6):e1008869

– Zebrafish differentially process colour across visual space to match natural scenes.
Zimmermann M.J.Y.*, Nevala N.E.*, Yoshimatsu T.*, Osorio D., Nilsson D.E., Berens P., Baden T.

Current Biology (2018) 28(13):2018-2032

(*: co-first authors) Note: Featured article

– α2δ-4 Is Required for the Molecular and Structural Organization of Rod and Cone Photoreceptor Synapses.
Kerov V., Laird J.G., Joiner M.L., Knecht S., Soh D., Hagen J., Gardner S.H., Gutierrez W., Yoshimatsu T., Bhattarai S., Puthussery T., Artemyev N.O., Drack A.V., Wong R.O., Baker S.A., Lee A.
Journal of Neuroscience (2018) 38(27): 6145-6160

– Stimulation of functional neuronal regeneration from Müller glia in adult mice.
Jorstad N.L., Wilken M.S., Grimes W.N., Wohl S.G., VandenBosch L.S., Yoshimatsu T., Wong R.O., Rieke F., Reh T.A.
Nature (2017) 548(7665): 103-107

– Uncoupling of neurogenesis and differentiation during retinal development
Engerer P., Suzuki S.C., Yoshimatsu T., Chapauton P., Obeng N., Odermatt B., Williams P.R., Misgeld T., Godhinho L
EMBO Journal (2017) 36(9): 1134-1146

– Mismatch of synaptic patterns between neurons produced in regeneraitona and deruign development of the vertebrate retina
D’Orazi F.D., Zhao X.F., Wong R.O.*, Yoshimatsu T.*
Current Biology (2016) 26(17): 2268-2279
(*: co-corresponding authors) Note: Featured article

– Glutamatergic monopolar interneurons provide a novel pathway of excitation in the mouse retina.
Della Santina L.*, Kuo S.P.*, Yoshimatsu T.*, Okawa H., Suzuki S.C., Hoon M., Tsuboyama K., Rieke F., Wong R.O.

Current Biology (2016) 26(15): 2070-2077 (*: co-first authors)

– Presynaptic partner selection during retinal circuit reassembly varies with timing of neuronal regeneration in vivo.
Yoshimatsu T., D’Orazi F.D., Gamlin C.R., Suzuki S.C., Suli A., Kimelman D., Raible D.W., Wong R.O.
Nature Communications (2016) 7: Article number 10590

– Müller glia provide essential tensile strength to the developing retina.
MacDonald R.B., Randlett O., Oswald J., Yoshimatsu T., Franze K., Harris W.A.
Journal of Cell Biology (2015) 10(7):1075-83.

– CentrinFish permit the visualization of centrosome dynamics in a cellular context in vivo.
Engerer P., Yoshimatsu T., Suzuki S.C., Godinho L.
Zebrafish (2014) 11(6): 586-587.

– Transmission from the dominant input shapes the stereotypic ratio of photoreceptor inputs onto horizontal cells.
Yoshimatsu T.*, Williams P.R.*, D’Orazi F.D., Suzuki S.C., Fadool J.M., Allison W.T., Raymond P.A., Wong R.O.
Nature Communications (2014) 5: Article number 3699.
(*: co-first authors)

– Cellular requirements for building a retinal neuropil.
Randlett O.*, MacDonald R.B.*, Yoshimatsu T., Almeida A.D., Suzuki S.C., Wong R.O., Harris W.A.
Cell Reports (2013) 3(2): 282-90.
(*: co-first authors)

– In vivo development of outer retinal synapses in the absence of glial contact.
Williams P.R., Suzuki S.C., Yoshimatsu T., Lawrence O.T., Waldron S.J., Parsons M.J., Nonet M.L., Wong R.O.
Journal of Neuroscience (2010) 30, 11951-11961.

– Selection of differentiating cells by different levels of delta-like 1 among neural precursor cells in the developing mouse telencephalon.
Kawaguchi D., Yoshimatsu T., Hozumi K., Gotoh Y.
Development (2008) 135, 3849-3858.

– Non-cell-autonomous action of STAT3 in maintenance of neural precursor cells in the mouse neocortex.
Yoshimatsu T., Kawaguchi D., Oishi K., Takeda K., Akira S., Masuyama N., Gotoh Y.
Development (2006) 133, 2553-2563.

– Hes binding to STAT3 mediates crosstalk between Notch and JAK-STAT signalling.
Kamakura, S., Oishi, K., Yoshimatsu, T., Nakafuku, M., Masuyama, N., Gotoh, Y.
Nature Cell Biology (2004) 6, 547-554.

– Notch promotes survival of neural precursor cells via mechanisms distinct from those regulating neurogenesis.
Oishi K., Kamakura S., Isazawa Y., Yoshimatsu T., Kuida K., Nakafuku M., Masuyama N., Gotoh Y.
Developmental Biology (2004) 276, 172-184.

– Illuminating the multifaceted roles of neurotransmission in shaping neuronal circuitry.
Okawa H., Hoon M., Yoshimatsu T., Della Santina L., Wong R.O.
Neuron (2014) 83(6): 1303-18. (review article)

– Development of synaptic input patterns on dendrites of retinal neurons.
D’Orazi F.D., Yoshimatsu T.
Dendrites: development and disease. (2016) 489-522. Editors: Emoto K., Wong R.O., Huang E., Hoogenraad C. Springer Japan (book chapter)

– Circuit Assembly in the Developing Vertebrate Retina.
Yoshimatsu T., Suzuki S.C., Wong R.O.
Cellular Migration and Formation of Neuronal Connections. (2013) 687-711. Editors: Rubenstein J.L.R. and Rakic P. Academic Press (book chapter)